ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100277790	uncharacterized LOC100277790
gma-u.5	100792213	zinc finger SWIM domain-containing protein 7
sly-u.5	101248165	uncharacterized LOC101248165
bra-r.6	103843698	zinc finger SWIM domain-containing protein 7
vvi-u.5	100259392	uncharacterized LOC100259392
ppo-u.5	7478724	uncharacterized LOC7478724
mtr-u.5	25481004	zinc finger SWIM domain-containing protein 7
mtr-u.5	11408530	zinc finger SWIM domain-containing protein 7
ghi-r.1	107886962	zinc finger SWIM domain-containing protein 7
ghi-r.1	107908858	zinc finger SWIM domain-containing protein 7
sot-r.1	102586723	zinc finger SWIM domain-containing protein 7
nta-r.1	107818204	uncharacterized LOC107818204
nta-r.1	107784698	uncharacterized LOC107784698
cre-r.1	CHLRE_16g668000v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0000724 [list] [network] double-strand break repair via homologous recombination

(84 genes)

IEA

GO CC

GO:0097196 [list] [network] Shu complex

(2 genes)

IEA

GO MF

GO:0008270 [list] [network] zinc ion binding

(824 genes)

IEA

Protein

XP_002463119.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, pero 3, extr 2, cyto_E.R. 2, cyto_plas 2

(predict for XP_002463119.2)

Subcellular
localization
TargetP

scret 4, chlo 3

(predict for XP_002463119.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100277790	gma-u.5 for 100792213	sly-u.5 for 101248165	bra-r.6 for 103843698	vvi-u.5 for 100259392	ppo-u.5 for 7478724	mtr-u.5 for 25481004	mtr-u.5 for 11408530	ghi-r.1 for 107886962	ghi-r.1 for 107908858	sot-r.1 for 102586723	nta-r.1 for 107818204	nta-r.1 for 107784698	cre-r.1 for CHLRE_16g668000v5

Ortholog

Ortholog ID: 9622

Species

zma

gma

sly

bra

vvi

ppo

mtr

ghi

sot

nta

cre

Symbol

Function^*

uncharacterized LOC100277790

zinc finger SWIM domain-containing protein 7

uncharacterized LOC101248165

zinc finger SWIM domain-containing protein 7

uncharacterized LOC100259392

uncharacterized LOC7478724

zinc finger SWIM domain-containing protein 7

uncharacterized LOC107818204

uncharacterized LOC107784698

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	2
bra00240	Pyrimidine metabolism	2
bra01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00510	N-Glycan biosynthesis	3
nta00513	Various types of N-glycan biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

100277790

100792213

101248165

103843698

100259392

7478724

25481004

11408530

107886962

107908858

102586723

107818204

107784698

5717713

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100277790 (zma-u.5 coexpression data)

Top 50 enrichment test to 100277790 (zma-u.5 coexpression data)


Species	zma	gma	sly	bra	vvi	ppo	mtr	ghi	sot	nta	cre	hvu	bdi	osa	tae	bna	sbi	ath	cit
Paralog	1	1	1	1	1	1	2	2	1	2	1	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100277790 (zma-u.5 coexpression data)

Top 50 enrichment test to 100277790 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**