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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8079458   peroxiredoxin-2E-2, chloroplastic 
 zma-u.5   100282052   uncharacterized LOC100282052 
 osa-u.5   4328586   peroxiredoxin-2E-2, chloroplastic-like 
 osa-u.5   4341570   peroxiredoxin-2E-1, chloroplastic-like 
 ath-u.5   AT3G52960   Thioredoxin superfamily protein 
 gma-u.5   100783307   peroxiredoxin-2E, chloroplastic 
 sly-u.5   104644379   peroxiredoxin-2E-2, chloroplastic 
 vvi-u.5   100264932   type II peroxiredoxin E 
 ppo-u.5   18104326   peroxiredoxin-2E, chloroplastic 
 mtr-u.5   25499388   peroxiredoxin-2E, chloroplastic 

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Top 50 coexpressed genes to 8079458 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8079458 (sbi-r.1 coexpression data)

CoexMap"8079458"


sbiLOC8079458 | Entrez gene ID : 8079458      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045454 [list] [network] cell redox homeostasis  (19 genes)  IEA  
GO:0034599 [list] [network] cellular response to oxidative stress  (40 genes)  IEA  
GO:0042744 [list] [network] hydrogen peroxide catabolic process  (156 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0008379 [list] [network] thioredoxin peroxidase activity  (6 genes)  IEA  
Protein XP_002453461.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002453461.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002453461.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8079458

.
zma-u.5
for
100282052

.
osa-u.5
for
4328586

.
osa-u.5
for
4341570

.
ath-u.5
for
AT3G52960

.
gma-u.5
for
100783307

.
sly-u.5
for
104644379

.
vvi-u.5
for
100264932

.
ppo-u.5
for
18104326

.
mtr-u.5
for
25499388

.


Ortholog ID: 5127
Species ath gma sly osa osa zma bra bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol AT3G52960 LOC100783307 LOC104644379 LOC4341570 LOC4328586 LOC100282052 LOC103872156 LOC103842281 LOC100264932 LOC18104326 LOC25499388 LOC123136781 LOC123166769 LOC123411553 LOC123403884 LOC107905354 LOC121214030 LOC106363452 LOC106385780 CHLRE_01g014350v5 LOC8083478 LOC8079458 LOC102596361 LOC102596276 LOC102616506 LOC100844889 LOC100845975 LOC107806837 LOC107826335
Function* Thioredoxin superfamily protein peroxiredoxin-2E, chloroplastic peroxiredoxin-2E-2, chloroplastic peroxiredoxin-2E-1, chloroplastic-like peroxiredoxin-2E-2, chloroplastic-like uncharacterized LOC100282052 peroxiredoxin-2E, chloroplastic peroxiredoxin-2E, chloroplastic type II peroxiredoxin E peroxiredoxin-2E, chloroplastic peroxiredoxin-2E, chloroplastic peroxiredoxin-2E-2, chloroplastic peroxiredoxin-2E-1, chloroplastic peroxiredoxin-2E-1, chloroplastic-like peroxiredoxin-2E-2, chloroplastic-like peroxiredoxin-2E, chloroplastic peroxiredoxin-2E, chloroplastic peroxiredoxin-2E, chloroplastic-like peroxiredoxin-2E, chloroplastic uncharacterized protein peroxiredoxin-2E-1, chloroplastic peroxiredoxin-2E-2, chloroplastic peroxiredoxin-2E-2, chloroplastic-like peroxiredoxin-2E-2, chloroplastic-like peroxiredoxin-2E, chloroplastic peroxiredoxin-2E-2, chloroplastic peroxiredoxin-2E-1, chloroplastic peroxiredoxin-2B peroxiredoxin-2B-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01210 2-Oxocarboxylic acid metabolism 4
ath00620 Pyruvate metabolism 3
ath01200 Carbon metabolism 3
ath00061 Fatty acid biosynthesis 3
ath01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma01230 Biosynthesis of amino acids 2
gma01240 Biosynthesis of cofactors 2
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 7
osa00010 Glycolysis / Gluconeogenesis 2
osa00710 Carbon fixation by Calvin cycle 2
osa01200 Carbon metabolism 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 5
osa01230 Biosynthesis of amino acids 3
osa00785 Lipoic acid metabolism 3
osa01240 Biosynthesis of cofactors 3
osa00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 8
bra00710 Carbon fixation by Calvin cycle 5
bra01230 Biosynthesis of amino acids 5
bra00010 Glycolysis / Gluconeogenesis 4
bra00030 Pentose phosphate pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 7
mtr01200 Carbon metabolism 5
mtr00710 Carbon fixation by Calvin cycle 3
mtr01210 2-Oxocarboxylic acid metabolism 3
mtr00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 6
tae00195 Photosynthesis 6
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
tae04016 MAPK signaling pathway - plant 2
tae04075 Plant hormone signal transduction 2
tae00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu01200 Carbon metabolism 2
hvu00261 Monobactam biosynthesis 2
hvu00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 5
ghi00240 Pyrimidine metabolism 3
ghi01232 Nucleotide metabolism 3
ghi01200 Carbon metabolism 3
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi00190 Oxidative phosphorylation 2
sbi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 5
sot00061 Fatty acid biosynthesis 3
sot01212 Fatty acid metabolism 3
sot00740 Riboflavin metabolism 2
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 7
sot00010 Glycolysis / Gluconeogenesis 6
sot01230 Biosynthesis of amino acids 6
sot01240 Biosynthesis of cofactors 3
sot00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 8
cit01230 Biosynthesis of amino acids 3
cit01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 4
bdi03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824462 100783307 104644379 4341570 4328586 100282052 103872156 103842281 100264932 18104326 25499388 123136781 123166769 123411553 123403884 107905354 121214030 106363452 106385780 5715086 8083478 8079458 102596361 102596276 102616506 100844889 100845975 107806837 107826335
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