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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8079925   ferredoxin--NADP reductase, embryo isozyme, chloroplastic 
 zma-u.5   542713   ferredoxin NADP reductase 1 
 zma-u.5   100194249   uncharacterized LOC100194249 
 osa-u.5   4334338   ferredoxin--NADP reductase, root isozyme, chloroplastic-like 
 osa-u.5   4342399   ferredoxin--NADP reductase, embryo isozyme, chloroplastic-like 
 ath-u.5   RFNR1   root FNR 1 
 ath-u.5   RFNR2   root FNR 2 
 gma-u.5   100789291   ferredoxin--NADP reductase, root isozyme, chloroplastic-like 
 gma-u.5   100807968   ferredoxin--NADP reductase, root isozyme, chloroplastic-like 
 sly-u.5   101268044   ferredoxin--NADP reductase, root-type isozyme, chloroplastic 
 vvi-u.5   100242418   ferredoxin--NADP reductase, root isozyme, chloroplastic 
 ppo-u.5   7487565   ferredoxin--NADP reductase, root isozyme, chloroplastic 
 mtr-u.5   11414418   ferredoxin--NADP reductase, root isozyme, chloroplastic 

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Top 50 coexpressed genes to 8079925 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8079925 (sbi-r.1 coexpression data)

CoexMap"8079925"


sbiLOC8079925 | Entrez gene ID : 8079925      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 2 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00195 [list] [network] Photosynthesis (76 genes)
GO BP
GO CC
GO MF
GO:0016491 [list] [network] oxidoreductase activity  (1434 genes)  IEA  
Protein XP_002461452.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002461452.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_002461452.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8079925

.
zma-u.5
for
542713

.
zma-u.5
for
100194249

.
osa-u.5
for
4334338

.
osa-u.5
for
4342399

.
ath-u.5
for
RFNR1

.
ath-u.5
for
RFNR2

.
gma-u.5
for
100789291

.
gma-u.5
for
100807968

.
sly-u.5
for
101268044

.
vvi-u.5
for
100242418

.
ppo-u.5
for
7487565

.
mtr-u.5
for
11414418

.


Ortholog ID: 5785
Species ath ath gma gma sly osa osa zma zma bra bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi nta nta
Symbol RFNR1 RFNR2 LOC100807968 LOC100789291 LOC101268044 LOC4334338 LOC4342399 LOC100194249 LOC542713 LOC103839748 LOC103840388 LOC100242418 LOC7487565 LOC11414418 LOC123188755 LOC123105301 LOC123452561 LOC123426272 LOC107906315 LOC107958513 LOC106406945 LOC106367268 CHLRE_11g476750v5 LOC8079925 LOC8083923 LOC102579393 LOC102579187 LOC102608960 LOC100843597 LOC107798204 LOC107825625
Function* root FNR 1 root FNR 2 ferredoxin--NADP reductase, root isozyme, chloroplastic-like ferredoxin--NADP reductase, root isozyme, chloroplastic-like ferredoxin--NADP reductase, root-type isozyme, chloroplastic ferredoxin--NADP reductase, root isozyme, chloroplastic-like ferredoxin--NADP reductase, embryo isozyme, chloroplastic-like uncharacterized LOC100194249 ferredoxin NADP reductase 1 ferredoxin--NADP reductase, root isozyme 1, chloroplastic ferredoxin--NADP reductase, root isozyme 2, chloroplastic ferredoxin--NADP reductase, root isozyme, chloroplastic ferredoxin--NADP reductase, root isozyme, chloroplastic ferredoxin--NADP reductase, root isozyme, chloroplastic ferredoxin--NADP reductase, embryo isozyme, chloroplastic ferredoxin--NADP reductase, root isozyme, chloroplastic ferredoxin--NADP reductase, root isozyme, chloroplastic ferredoxin--NADP reductase, embryo isozyme, chloroplastic ferredoxin--NADP reductase, root-type isozyme, chloroplastic ferredoxin--NADP reductase, root isozyme, chloroplastic ferredoxin--NADP reductase, root isozyme 2, chloroplastic-like ferredoxin--NADP reductase, root isozyme 2, chloroplastic uncharacterized protein ferredoxin--NADP reductase, embryo isozyme, chloroplastic ferredoxin--NADP reductase, root isozyme, chloroplastic ferredoxin--NADP reductase, root-type isozyme, chloroplastic-like ferredoxin--NADP reductase, root-type isozyme, chloroplastic ferredoxin--NADP reductase, root isozyme, chloroplastic ferredoxin--NADP reductase, root isozyme, chloroplastic ferredoxin--NADP reductase, root-type isozyme, chloroplastic-like ferredoxin--NADP reductase, root-type isozyme, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 7
ath00030 Pentose phosphate pathway 4
ath00480 Glutathione metabolism 4
ath01230 Biosynthesis of amino acids 4
ath00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath00030 Pentose phosphate pathway 4
ath00480 Glutathione metabolism 4
ath00910 Nitrogen metabolism 4
ath00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 4
gma00195 Photosynthesis 4
gma00030 Pentose phosphate pathway 3
gma01200 Carbon metabolism 3
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 5
gma01310 Nitrogen cycle 4
gma00195 Photosynthesis 4
gma01240 Biosynthesis of cofactors 3
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 8
sly00030 Pentose phosphate pathway 5
sly01230 Biosynthesis of amino acids 4
sly00710 Carbon fixation by Calvin cycle 3
sly00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00910 Nitrogen metabolism 5
osa01310 Nitrogen cycle 5
osa00195 Photosynthesis 3
osa00480 Glutathione metabolism 3
osa01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 6
osa01200 Carbon metabolism 5
osa01230 Biosynthesis of amino acids 3
osa03018 RNA degradation 2
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00620 Pyruvate metabolism 2
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
zma00562 Inositol phosphate metabolism 2
zma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00910 Nitrogen metabolism 4
zma01310 Nitrogen cycle 3
zma01200 Carbon metabolism 3
zma00195 Photosynthesis 3
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 7
bra00030 Pentose phosphate pathway 5
bra00910 Nitrogen metabolism 4
bra01310 Nitrogen cycle 4
bra00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 6
bra00030 Pentose phosphate pathway 4
bra00195 Photosynthesis 3
bra00480 Glutathione metabolism 3
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00910 Nitrogen metabolism 2
vvi01310 Nitrogen cycle 2
vvi03010 Ribosome 2
vvi00030 Pentose phosphate pathway 2
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 4
ppo00195 Photosynthesis 4
ppo00910 Nitrogen metabolism 3
ppo01310 Nitrogen cycle 3
ppo00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 4
mtr00195 Photosynthesis 3
mtr01230 Biosynthesis of amino acids 3
mtr00910 Nitrogen metabolism 3
mtr00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 4
tae00030 Pentose phosphate pathway 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 5
tae00030 Pentose phosphate pathway 5
tae00480 Glutathione metabolism 5
tae01200 Carbon metabolism 5
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 4
hvu01200 Carbon metabolism 4
hvu00030 Pentose phosphate pathway 3
hvu01230 Biosynthesis of amino acids 3
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
ghi00053 Ascorbate and aldarate metabolism 2
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
ghi00053 Ascorbate and aldarate metabolism 2
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 8
cre00710 Carbon fixation by Calvin cycle 7
cre00195 Photosynthesis 5
cre00010 Glycolysis / Gluconeogenesis 4
cre00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 3
sbi00195 Photosynthesis 3
sbi03010 Ribosome 3
sbi00030 Pentose phosphate pathway 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00910 Nitrogen metabolism 4
sbi00030 Pentose phosphate pathway 3
sbi01200 Carbon metabolism 3
sbi00195 Photosynthesis 3
sbi01310 Nitrogen cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00910 Nitrogen metabolism 5
sot01200 Carbon metabolism 4
sot01230 Biosynthesis of amino acids 3
sot01310 Nitrogen cycle 3
sot00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00910 Nitrogen metabolism 5
sot01200 Carbon metabolism 4
sot01230 Biosynthesis of amino acids 3
sot01310 Nitrogen cycle 3
sot00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 7
cit00710 Carbon fixation by Calvin cycle 4
cit00030 Pentose phosphate pathway 3
cit00480 Glutathione metabolism 3
cit00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00480 Glutathione metabolism 3
bdi00030 Pentose phosphate pathway 3
bdi01200 Carbon metabolism 3
bdi01230 Biosynthesis of amino acids 2
bdi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 8
nta00030 Pentose phosphate pathway 6
nta00710 Carbon fixation by Calvin cycle 6
nta01200 Carbon metabolism 6
nta00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 6
nta00710 Carbon fixation by Calvin cycle 6
nta01200 Carbon metabolism 6
nta01230 Biosynthesis of amino acids 6
nta03050 Proteasome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825887 839930 100807968 100789291 101268044 4334338 4342399 100194249 542713 103839748 103840388 100242418 7487565 11414418 123188755 123105301 123452561 123426272 107906315 107958513 106406945 106367268 5722854 8079925 8083923 102579393 102579187 102608960 100843597 107798204 107825625
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