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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8082662   nuclear cap-binding protein subunit 1 
 zma-u.5   100384700   nuclear cap-binding protein subunit 1 
 osa-u.5   4332822   nuclear cap-binding protein subunit 1-like 
 ath-u.5   ABH1   ARM repeat superfamily protein 
 gma-u.5   100811738   nuclear cap-binding protein subunit 1 
 gma-u.5   100791079   nuclear cap-binding protein subunit 1 
 sly-u.5   101249122   nuclear cap-binding protein subunit 1 
 vvi-u.5   100265341   nuclear cap-binding protein subunit 1 
 ppo-u.5   7482342   nuclear cap-binding protein subunit 1 
 mtr-u.5   11429115   nuclear cap-binding protein subunit 1 

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Top 50 coexpressed genes to 8082662 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8082662 (sbi-r.1 coexpression data)

CoexMap"8082662"


sbiLOC8082662 | Entrez gene ID : 8082662      
Species sbi zma osa ath gma sly vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi cre
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03013 [list] [network] Nucleocytoplasmic transport (112 genes)
sbi03015 [list] [network] mRNA surveillance pathway (120 genes)
sbi03040 [list] [network] Spliceosome (208 genes)
GO BP
GO:0000184 [list] [network] nuclear-transcribed mRNA catabolic process, nonsense-mediated decay  (12 genes)  IEA  
GO:0006406 [list] [network] mRNA export from nucleus  (29 genes)  IEA  
GO CC
GO:0005846 [list] [network] nuclear cap binding complex  (2 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0000339 [list] [network] RNA cap binding  (8 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (267 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002467864.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3  (predict for XP_002467864.2)
Subcellular
localization
TargetP
other 7,  mito 6  (predict for XP_002467864.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8082662

.
zma-u.5
for
100384700

.
osa-u.5
for
4332822

.
ath-u.5
for
ABH1

.
gma-u.5
for
100811738

.
gma-u.5
for
100791079

.
sly-u.5
for
101249122

.
vvi-u.5
for
100265341

.
ppo-u.5
for
7482342

.
mtr-u.5
for
11429115

.


Ortholog ID: 8870
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol ABH1 LOC100791079 LOC100811738 LOC101249122 LOC4332822 LOC100384700 LOC103860374 LOC100265341 LOC7482342 LOC11429115 LOC123085833 LOC123092050 LOC123448673 LOC107939466 LOC107945163 LOC106439757 LOC106389405 CHLRE_12g524100v5 LOC8082662 LOC102588913 LOC102628799 LOC100839026 LOC107827611 LOC107807683
Function* ARM repeat superfamily protein nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1-like nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1-like nuclear cap-binding protein subunit 1 uncharacterized protein nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1 nuclear cap-binding protein subunit 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath00970 Aminoacyl-tRNA biosynthesis 4
ath03013 Nucleocytoplasmic transport 3
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 4
sly03013 Nucleocytoplasmic transport 4
sly03018 RNA degradation 2
sly03020 RNA polymerase 2
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
osa00970 Aminoacyl-tRNA biosynthesis 5
osa03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 6
zma03040 Spliceosome 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 4
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo03040 Spliceosome 3
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr03020 RNA polymerase 2
mtr03040 Spliceosome 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03015 mRNA surveillance pathway 4
tae03040 Spliceosome 4
tae00053 Ascorbate and aldarate metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 5
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 4
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 6
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi04626 Plant-pathogen interaction 2
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi04626 Plant-pathogen interaction 2
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna04120 Ubiquitin mediated proteolysis 3
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna04120 Ubiquitin mediated proteolysis 3
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 3
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 6
sot03015 mRNA surveillance pathway 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03013 Nucleocytoplasmic transport 3
cit00970 Aminoacyl-tRNA biosynthesis 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 6
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 815840 100791079 100811738 101249122 4332822 100384700 103860374 100265341 7482342 11429115 123085833 123092050 123448673 107939466 107945163 106439757 106389405 5722525 8082662 102588913 102628799 100839026 107827611 107807683
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