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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8082668   ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic 
 zma-u.5   100282645   ATP-dependent Clp protease proteolytic subunit 
 osa-u.5   4332811   ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic 
 ath-u.5   AT1G09130   ATP-dependent caseinolytic (Clp) protease/crotonase family protein 
 gma-u.5   100818038   ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic 
 sly-u.5   101253726   ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic 
 vvi-u.5   100249495   ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic 
 ppo-u.5   7481734   ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic 
 mtr-u.5   11434169   ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic 

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Top 50 coexpressed genes to 8082668 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8082668 (sbi-r.1 coexpression data)

CoexMap"8082668"


sbiLOC8082668 | Entrez gene ID : 8082668      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006515 [list] [network] protein quality control for misfolded or incompletely synthesized proteins  (16 genes)  IEA  
GO CC
GO:0009368 [list] [network] endopeptidase Clp complex  (10 genes)  IEA  
GO MF
GO:0051117 [list] [network] ATPase binding  (13 genes)  IEA  
GO:0004176 [list] [network] ATP-dependent peptidase activity  (26 genes)  IEA  
GO:0004252 [list] [network] serine-type endopeptidase activity  (118 genes)  IEA  
Protein XP_002465289.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  E.R. 1,  nucl 1,  mito 1,  vacu 1,  E.R._plas 1,  cyto_E.R. 1  (predict for XP_002465289.1)
Subcellular
localization
TargetP
chlo 7,  mito 3  (predict for XP_002465289.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8082668

.
zma-u.5
for
100282645

.
osa-u.5
for
4332811

.
ath-u.5
for
AT1G09130

.
gma-u.5
for
100818038

.
sly-u.5
for
101253726

.
vvi-u.5
for
100249495

.
ppo-u.5
for
7481734

.
mtr-u.5
for
11434169

.


Ortholog ID: 9766
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna cre sbi sot cit bdi nta nta
Symbol AT1G09130 LOC100818038 LOC101253726 LOC4332811 LOC100282645 LOC103836358 LOC100249495 LOC7481734 LOC11434169 LOC123091978 LOC123085850 LOC123448625 LOC107930939 LOC107961929 LOC106413839 CHLRE_07g331500v5 LOC8082668 LOC102605608 LOC102612739 LOC100841462 LOC107808620 LOC107827580
Function* ATP-dependent caseinolytic (Clp) protease/crotonase family protein ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic uncharacterized protein ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00480 Glutathione metabolism 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01232 Nucleotide metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00790 Folate biosynthesis 3
ghi01240 Biosynthesis of cofactors 3
ghi04981 Folate transport and metabolism 3
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00790 Folate biosynthesis 3
ghi01240 Biosynthesis of cofactors 3
ghi04981 Folate transport and metabolism 3
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00785 Lipoic acid metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 2
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00350 Tyrosine metabolism 2
sbi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi00561 Glycerolipid metabolism 2
bdi00566 Sulfoquinovose metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837432 100818038 101253726 4332811 100282645 103836358 100249495 7481734 11434169 123091978 123085850 123448625 107930939 107961929 106413839 5716097 8082668 102605608 102612739 100841462 107808620 107827580
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