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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8083299   calcium homeostasis endoplasmic reticulum protein 
 zma-u.5   100216800   uncharacterized LOC100216800 
 osa-u.5   9266375   uncharacterized LOC9266375 
 ath-u.5   AT4G31200   SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein 
 gma-u.5   100816468   calcium homeostasis endoplasmic reticulum protein 
 gma-u.5   100802329   calcium homeostasis endoplasmic reticulum protein 
 sly-u.5   101253640   uncharacterized LOC101253640 
 vvi-u.5   100255482   uncharacterized LOC100255482 
 vvi-u.5   100253849   uncharacterized LOC100253849 
 ppo-u.5   18107571   uncharacterized LOC18107571 
 ppo-u.5   18100800   uncharacterized LOC18100800 
 mtr-u.5   11415192   calcium homeostasis endoplasmic reticulum protein 

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Top 50 coexpressed genes to 8083299 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8083299 (sbi-r.1 coexpression data)

CoexMap"8083299"


sbiLOC8083299 | Entrez gene ID : 8083299      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 2 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006874 [list] [network] intracellular calcium ion homeostasis  (28 genes)  IEA  
GO:0006396 [list] [network] RNA processing  (599 genes)  IEA  
GO CC
GO:0048471 [list] [network] perinuclear region of cytoplasm  (8 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_002438869.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002438869.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002438869.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8083299

.
zma-u.5
for
100216800

.
osa-u.5
for
9266375

.
ath-u.5
for
AT4G31200

.
gma-u.5
for
100816468

.
gma-u.5
for
100802329

.
sly-u.5
for
101253640

.
vvi-u.5
for
100255482

.
vvi-u.5
for
100253849

.
ppo-u.5
for
18107571

.
ppo-u.5
for
18100800

.
mtr-u.5
for
11415192

.


Ortholog ID: 9055
Species ath gma gma sly osa zma bra vvi vvi ppo ppo mtr tae tae hvu ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT4G31200 LOC100802329 LOC100816468 LOC101253640 LOC9266375 LOC100216800 LOC103852032 LOC100253849 LOC100255482 LOC18100800 LOC18107571 LOC11415192 LOC123148963 LOC123165691 LOC123410105 LOC107962152 LOC106354715 LOC106383852 CHLRE_04g222300v5 LOC8083299 PPS2 LOC102606916 LOC100846183 LOC107792995 LOC107803793
Function* SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein calcium homeostasis endoplasmic reticulum protein calcium homeostasis endoplasmic reticulum protein uncharacterized LOC101253640 uncharacterized LOC9266375 uncharacterized LOC100216800 calcium homeostasis endoplasmic reticulum protein uncharacterized LOC100253849 uncharacterized LOC100255482 uncharacterized LOC18100800 uncharacterized LOC18107571 calcium homeostasis endoplasmic reticulum protein calcium homeostasis endoplasmic reticulum protein calcium homeostasis endoplasmic reticulum protein calcium homeostasis endoplasmic reticulum protein uncharacterized LOC107962152 calcium homeostasis endoplasmic reticulum protein-like calcium homeostasis endoplasmic reticulum protein-like uncharacterized protein calcium homeostasis endoplasmic reticulum protein calcium homeostasis endoplasmic reticulum protein-like uncharacterized LOC102606916 calcium homeostasis endoplasmic reticulum protein SUPPRESSOR-OF-WHITE-APRICOT/SURP RNA-binding domain containing protein 1 SUPPRESSOR-OF-WHITE-APRICOT/SURP RNA-binding domain containing protein 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03410 Base excision repair 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03040 Spliceosome 2
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
ghi03018 RNA degradation 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00510 N-Glycan biosynthesis 3
sot00513 Various types of N-glycan biosynthesis 3
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 4
cit03040 Spliceosome 2
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829247 100802329 100816468 101253640 9266375 100216800 103852032 100253849 100255482 18100800 18107571 11415192 123148963 123165691 123410105 107962152 106354715 106383852 5717868 8083299 102578923 102606916 100846183 107792995 107803793
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