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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8084413   pentatricopeptide repeat-containing protein At5g41170, mitochondrial 
 zma-u.5   103650263   pentatricopeptide repeat-containing protein At5g16640, mitochondrial 
 osa-u.5   107275716   pentatricopeptide repeat-containing protein At5g41170, mitochondrial 
 ath-u.5   AT1G30290   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100802835   pentatricopeptide repeat-containing protein At1g09900 
 gma-u.5   100791479   pentatricopeptide repeat-containing protein At1g09900 
 sly-u.5   101268891   pentatricopeptide repeat-containing protein At1g09900 
 vvi-u.5   100244620   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 ppo-u.5   7497054   pentatricopeptide repeat-containing protein At1g09900 
 mtr-u.5   11445619   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 

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Top 50 coexpressed genes to 8084413 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8084413 (sbi-r.1 coexpression data)

CoexMap"8084413"


sbiLOC8084413 | Entrez gene ID : 8084413    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_021301358.1 [sequence] [blastp]
XP_021301359.1 [sequence] [blastp]
XP_021301360.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 3,  cyto 1,  E.R. 1,  cysk_nucl 1,  cyto_E.R. 1  (predict for XP_021301358.1)
chlo 5,  mito 3,  cyto 1,  E.R. 1,  cysk_nucl 1,  cyto_E.R. 1  (predict for XP_021301359.1)
chlo 5,  mito 3,  cyto 1,  E.R. 1,  cysk_nucl 1,  cyto_E.R. 1  (predict for XP_021301360.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_021301358.1)
mito 9  (predict for XP_021301359.1)
mito 9  (predict for XP_021301360.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8084413

.
zma-u.5
for
103650263

.
osa-u.5
for
107275716

.
ath-u.5
for
AT1G30290

.
gma-u.5
for
100802835

.
gma-u.5
for
100791479

.
sly-u.5
for
101268891

.
vvi-u.5
for
100244620

.
ppo-u.5
for
7497054

.
mtr-u.5
for
11445619

.


Ortholog ID: 9818
Species ath gma gma sly osa zma bra vvi ppo mtr hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G30290 LOC100802835 LOC100791479 LOC101268891 LOC107275716 LOC103650263 LOC103840412 LOC100244620 LOC7497054 LOC11445619 LOC123397750 LOC107913809 LOC107937511 LOC106411529 LOC106367284 LOC8084413 LOC102588334 LOC112495474 LOC100839767 LOC107776135 LOC107781845
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At5g41170, mitochondrial pentatricopeptide repeat-containing protein At5g16640, mitochondrial pentatricopeptide repeat-containing protein At5g41170, mitochondrial pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At5g41170, mitochondrial pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g41170, mitochondrial pentatricopeptide repeat-containing protein At5g41170, mitochondrial pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At5g16640, mitochondrial pentatricopeptide repeat-containing protein At5g41170, mitochondrial uncharacterized LOC107776135 uncharacterized LOC107781845
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03040 Spliceosome 3
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03040 Spliceosome 3
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 4
sot04016 MAPK signaling pathway - plant 4
sot04070 Phosphatidylinositol signaling system 4
sot04075 Plant hormone signal transduction 4
sot04626 Plant-pathogen interaction 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839909 100802835 100791479 101268891 107275716 103650263 103840412 100244620 7497054 11445619 123397750 107913809 107937511 106411529 106367284 8084413 102588334 112495474 100839767 107776135 107781845
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