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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8084839   polypyrimidine tract-binding protein homolog 1 
 zma-u.5   103651483   polypyrimidine tract-binding protein homolog 1 
 osa-u.5   4326619   polypyrimidine tract-binding protein homolog 1 
 tae-r.2   123061506   polypyrimidine tract-binding protein homolog 1 
 tae-r.2   123070150   polypyrimidine tract-binding protein homolog 1 
 hvu-r.1   123443897   polypyrimidine tract-binding protein homolog 1-like 
 bdi-r.1   100846907   polypyrimidine tract-binding protein homolog 1 
 ath-u.5   PTB2   polypyrimidine tract-binding protein 2 
 gma-u.5   100778533   polypyrimidine tract-binding protein homolog 2 
 gma-u.5   100810102   polypyrimidine tract-binding protein homolog 2-like 
 gma-u.5   100813651   polypyrimidine tract-binding protein homolog 2-like 
 sly-u.5   101251752   polypyrimidine tract-binding protein homolog 2 
 bra-r.6   103857097   polypyrimidine tract-binding protein homolog 2 
 ppo-u.5   112323233   polypyrimidine tract-binding protein homolog 2 
 ppo-u.5   7453843   polypyrimidine tract-binding protein homolog 2 
 mtr-u.5   11425189   polypyrimidine tract-binding protein homolog 2 
 mtr-u.5   25482365   polypyrimidine tract-binding protein homolog 2 
 ghi-r.1   107947257   polypyrimidine tract-binding protein homolog 2 
 ghi-r.1   107917923   polypyrimidine tract-binding protein homolog 2 
 ghi-r.1   107929595   polypyrimidine tract-binding protein homolog 2 
 bna-r.1   106437563   polypyrimidine tract-binding protein homolog 2 
 bna-r.1   106418423   polypyrimidine tract-binding protein homolog 2 
 bna-r.1   106437509   polypyrimidine tract-binding protein homolog 2 
 sot-r.1   102602437   polypyrimidine tract-binding protein homolog 2 
 sot-r.1   102585056   polypyrimidine tract-binding protein homolog 2 
 cit-r.1   102607906   polypyrimidine tract-binding protein homolog 2 
 nta-r.1   107830289   polypyrimidine tract-binding protein homolog 2 
 nta-r.1   107804511   polypyrimidine tract-binding protein homolog 2 
 nta-r.1   107783414   polypyrimidine tract-binding protein homolog 2 

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Top 50 coexpressed genes to 8084839 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8084839 (sbi-r.1 coexpression data)

CoexMap"8084839"


sbiLOC8084839 | Entrez gene ID : 8084839      
Species sbi zma osa tae hvu bdi ath gma sly bra ppo mtr ghi bna sot cit nta cre vvi
Paralog 1 1 1 2 1 1 1 3 1 1 2 2 3 3 2 1 3 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043484 [list] [network] regulation of RNA splicing  (24 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (267 genes)  IEA  
Protein XP_002458169.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 2,  mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_002458169.1)
Subcellular
localization
TargetP
other 5,  mito 5  (predict for XP_002458169.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8084839
zma-u.5
for
103651483
osa-u.5
for
4326619
tae-r.2
for
123061506
tae-r.2
for
123070150
hvu-r.1
for
123443897
bdi-r.1
for
100846907
ath-u.5
for
PTB2
gma-u.5
for
100778533
gma-u.5
for
100810102
gma-u.5
for
100813651
sly-u.5
for
101251752
bra-r.6
for
103857097
ppo-u.5
for
112323233
ppo-u.5
for
7453843
mtr-u.5
for
11425189
mtr-u.5
for
25482365
ghi-r.1
for
107947257
ghi-r.1
for
107917923
ghi-r.1
for
107929595
bna-r.1
for
106437563
bna-r.1
for
106418423
bna-r.1
for
106437509
sot-r.1
for
102602437
sot-r.1
for
102585056
cit-r.1
for
102607906
nta-r.1
for
107830289
nta-r.1
for
107804511
nta-r.1
for
107783414


Ortholog ID: 6995
Species sbi zma osa tae tae hvu bdi ath gma gma gma sly bra ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit nta nta nta
Symbol LOC8084839 LOC103651483 LOC4326619 LOC123061506 LOC123070150 LOC123443897 LOC100846907 PTB2 LOC100778533 LOC100810102 LOC100813651 LOC101251752 LOC103857097 LOC112323233 LOC7453843 LOC11425189 LOC25482365 LOC107947257 LOC107917923 LOC107945949 LOC106437563 LOC106418423 LOC106437509 LOC102602437 LOC102585056 LOC102607906 LOC107830289 LOC107804511 LOC107803079
Function* polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1-like polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2-like polypyrimidine tract-binding protein homolog 2-like polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03022 Basal transcription factors 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04145 Phagosome 2
gma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00531 Glycosaminoglycan degradation 3
gma00230 Purine metabolism 2
gma01232 Nucleotide metabolism 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 3
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
sly03040 Spliceosome 2
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8084839 103651483 4326619 123061506 123070150 123443897 100846907 835399 100778533 100810102 100813651 101251752 103857097 112323233 7453843 11425189 25482365 107947257 107917923 107945949 106437563 106418423 106437509 102602437 102585056 102607906 107830289 107804511 107803079
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