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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8085012   putative aconitate hydratase, cytoplasmic 
 zma-u.5   103647708   putative aconitate hydratase, cytoplasmic 
 zma-u.5   100304315   aconitase3 
 zma-u.5   100281040   aconitase 2 
 osa-u.5   9270306   putative aconitate hydratase, cytoplasmic 
 osa-u.5   4331547   putative aconitate hydratase, cytoplasmic 
 ath-u.5   ACO3   aconitase 3 
 ath-u.5   ACO2   aconitase 2 
 ath-u.5   ACO1   aconitase 1 
 gma-u.5   100778506   aconitate hydratase, cytoplasmic 
 gma-u.5   100793264   aconitate hydratase, cytoplasmic 
 gma-u.5   100794803   aconitate hydratase, cytoplasmic 
 sly-u.5   101254008   aconitate hydratase, cytoplasmic 
 sly-u.5   101248455   aconitate hydratase, cytoplasmic 
 vvi-u.5   100256776   aconitate hydratase, cytoplasmic 
 vvi-u.5   100253811   aconitate hydratase, cytoplasmic 
 vvi-u.5   100242027   aconitate hydratase 1 
 ppo-u.5   18101054   aconitate hydratase 1 
 ppo-u.5   7468501   aconitate hydratase, cytoplasmic 
 ppo-u.5   18103734   aconitate hydratase, cytoplasmic 
 mtr-u.5   11421844   aconitate hydratase 1 
 mtr-u.5   11440920   aconitate hydratase, cytoplasmic 
 mtr-u.5   11416041   aconitate hydratase, cytoplasmic 

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Top 50 coexpressed genes to 8085012 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8085012 (sbi-r.1 coexpression data)

CoexMap"8085012"


sbiLOC8085012 | Entrez gene ID : 8085012      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 2 3 3 2 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00020 [list] [network] Citrate cycle (TCA cycle) (53 genes)
sbi00630 [list] [network] Glyoxylate and dicarboxylate metabolism (73 genes)
sbi01200 [list] [network] Carbon metabolism (264 genes)
sbi01210 [list] [network] 2-Oxocarboxylic acid metabolism (77 genes)
sbi01230 [list] [network] Biosynthesis of amino acids (224 genes)
GO BP
GO:0006101 [list] [network] citrate metabolic process  (5 genes)  IEA  
GO:0006099 [list] [network] tricarboxylic acid cycle  (46 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (539 genes)  IEA  
GO:0005829 [list] [network] cytosol  (856 genes)  IEA  
GO MF
GO:0003994 [list] [network] aconitate hydratase activity  (4 genes)  IEA  
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding  (26 genes)  IEA  
Protein XP_002445174.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4,  cyto_mito 3  (predict for XP_002445174.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_002445174.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8085012

.
zma-u.5
for
103647708

.
zma-u.5
for
100304315

.
zma-u.5
for
100281040

.
osa-u.5
for
9270306

.
osa-u.5
for
4331547

.
ath-u.5
for
ACO3

.
ath-u.5
for
ACO2

.
ath-u.5
for
ACO1

.
gma-u.5
for
100778506

.
gma-u.5
for
100793264

.
gma-u.5
for
100794803

.
sly-u.5
for
101254008

.
sly-u.5
for
101248455

.
vvi-u.5
for
100256776

.
vvi-u.5
for
100253811

.
vvi-u.5
for
100242027

.
ppo-u.5
for
18101054

.
ppo-u.5
for
7468501

.
ppo-u.5
for
18103734

.
mtr-u.5
for
11421844

.
mtr-u.5
for
11440920

.
mtr-u.5
for
11416041

.


Ortholog ID: 1068
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol ACO3 ACO1 LOC100778506 LOC100810088 LOC101254008 LOC101248455 LOC4331547 LOC9270306 LOC100216599 LOC100304277 LOC103873312 LOC103834926 LOC100256776 LOC100242027 LOC18101054 LOC18103734 LOC11440920 LOC11421844 LOC100682506 LOC123169042 LOC123410210 LOC123449737 LOC107887413 LOC107945794 LOC106405661 LOC106351933 CHLRE_01g042750v5 LOC8085012 LOC8064309 LOC102587698 LOC102589351 LOC102628904 LOC102609713 LOC100838918 LOC100842898 LOC107778837 LOC107774559
Function* aconitase 3 aconitase 1 aconitate hydratase, cytoplasmic aconitate hydratase, cytoplasmic aconitate hydratase, cytoplasmic aconitate hydratase, cytoplasmic putative aconitate hydratase, cytoplasmic putative aconitate hydratase, cytoplasmic aconitase1 Aconitate hydratase 1 aconitate hydratase 1 aconitate hydratase 1 aconitate hydratase, cytoplasmic aconitate hydratase 1 aconitate hydratase 1 aconitate hydratase, cytoplasmic aconitate hydratase, cytoplasmic aconitate hydratase 1 putative aconitate hydratase, cytoplasmic aconitate hydratase, cytoplasmic aconitate hydratase, cytoplasmic-like putative aconitate hydratase, cytoplasmic aconitate hydratase, cytoplasmic aconitate hydratase, cytoplasmic aconitate hydratase 1 aconitate hydratase 1-like uncharacterized protein putative aconitate hydratase, cytoplasmic putative aconitate hydratase, cytoplasmic aconitate hydratase, cytoplasmic-like aconitate hydratase, cytoplasmic aconitate hydratase, cytoplasmic aconitate hydratase, cytoplasmic putative aconitate hydratase, cytoplasmic putative aconitate hydratase, cytoplasmic aconitate hydratase, cytoplasmic aconitate hydratase, cytoplasmic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 8
ath00020 Citrate cycle (TCA cycle) 6
ath01210 2-Oxocarboxylic acid metabolism 6
ath00190 Oxidative phosphorylation 5
ath00630 Glyoxylate and dicarboxylate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00071 Fatty acid degradation 4
ath01200 Carbon metabolism 4
ath01210 2-Oxocarboxylic acid metabolism 4
ath01230 Biosynthesis of amino acids 4
ath00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma00020 Citrate cycle (TCA cycle) 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma01200 Carbon metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 13
gma00020 Citrate cycle (TCA cycle) 12
gma01210 2-Oxocarboxylic acid metabolism 7
gma00190 Oxidative phosphorylation 6
gma01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 8
sly00020 Citrate cycle (TCA cycle) 7
sly00190 Oxidative phosphorylation 5
sly01210 2-Oxocarboxylic acid metabolism 5
sly01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01210 2-Oxocarboxylic acid metabolism 4
sly00071 Fatty acid degradation 3
sly01212 Fatty acid metabolism 3
sly04016 MAPK signaling pathway - plant 3
sly01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 11
osa00020 Citrate cycle (TCA cycle) 9
osa01210 2-Oxocarboxylic acid metabolism 8
osa00785 Lipoic acid metabolism 4
osa01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 10
osa00020 Citrate cycle (TCA cycle) 5
osa00620 Pyruvate metabolism 5
osa00630 Glyoxylate and dicarboxylate metabolism 5
osa01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 7
zma00190 Oxidative phosphorylation 5
zma04145 Phagosome 5
zma00630 Glyoxylate and dicarboxylate metabolism 4
zma00071 Fatty acid degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 14
zma00020 Citrate cycle (TCA cycle) 13
zma01210 2-Oxocarboxylic acid metabolism 8
zma00190 Oxidative phosphorylation 6
zma00620 Pyruvate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
bra01200 Carbon metabolism 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
bra00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 2
bra00020 Citrate cycle (TCA cycle) 2
bra01200 Carbon metabolism 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 7
vvi04141 Protein processing in endoplasmic reticulum 6
vvi01200 Carbon metabolism 5
vvi00020 Citrate cycle (TCA cycle) 3
vvi01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi00020 Citrate cycle (TCA cycle) 3
vvi00630 Glyoxylate and dicarboxylate metabolism 3
vvi01200 Carbon metabolism 3
vvi01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00020 Citrate cycle (TCA cycle) 6
ppo01200 Carbon metabolism 6
ppo01210 2-Oxocarboxylic acid metabolism 5
ppo00620 Pyruvate metabolism 4
ppo00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 5
mtr03013 Nucleocytoplasmic transport 4
mtr00020 Citrate cycle (TCA cycle) 4
mtr01210 2-Oxocarboxylic acid metabolism 4
mtr00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 4
mtr01200 Carbon metabolism 3
mtr04142 Lysosome 3
mtr00020 Citrate cycle (TCA cycle) 2
mtr01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae01200 Carbon metabolism 2
tae01210 2-Oxocarboxylic acid metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae01200 Carbon metabolism 2
tae01210 2-Oxocarboxylic acid metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 12
hvu00010 Glycolysis / Gluconeogenesis 8
hvu00020 Citrate cycle (TCA cycle) 7
hvu00620 Pyruvate metabolism 6
hvu01210 2-Oxocarboxylic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 7
ghi01210 2-Oxocarboxylic acid metabolism 7
ghi01230 Biosynthesis of amino acids 7
ghi00020 Citrate cycle (TCA cycle) 5
ghi00630 Glyoxylate and dicarboxylate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi01200 Carbon metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 4
ghi01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 5
bna00630 Glyoxylate and dicarboxylate metabolism 5
bna01200 Carbon metabolism 5
bna01210 2-Oxocarboxylic acid metabolism 5
bna01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 5
bna00630 Glyoxylate and dicarboxylate metabolism 5
bna01200 Carbon metabolism 5
bna01210 2-Oxocarboxylic acid metabolism 5
bna01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00020 Citrate cycle (TCA cycle) 11
cre01200 Carbon metabolism 11
cre01210 2-Oxocarboxylic acid metabolism 4
cre00190 Oxidative phosphorylation 3
cre00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 8
sbi04145 Phagosome 8
sbi04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00020 Citrate cycle (TCA cycle) 9
sot01200 Carbon metabolism 9
sot01210 2-Oxocarboxylic acid metabolism 8
sot00785 Lipoic acid metabolism 4
sot01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 6
sot01210 2-Oxocarboxylic acid metabolism 5
sot00020 Citrate cycle (TCA cycle) 4
sot00071 Fatty acid degradation 3
sot00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00020 Citrate cycle (TCA cycle) 3
cit01200 Carbon metabolism 3
cit00190 Oxidative phosphorylation 3
cit00640 Propanoate metabolism 2
cit00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 4
bdi00020 Citrate cycle (TCA cycle) 3
bdi01200 Carbon metabolism 3
bdi01210 2-Oxocarboxylic acid metabolism 3
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00020 Citrate cycle (TCA cycle) 7
bdi01200 Carbon metabolism 7
bdi01210 2-Oxocarboxylic acid metabolism 5
bdi01230 Biosynthesis of amino acids 4
bdi00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 8
nta01230 Biosynthesis of amino acids 6
nta00020 Citrate cycle (TCA cycle) 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta00020 Citrate cycle (TCA cycle) 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta01200 Carbon metabolism 2
nta01210 2-Oxocarboxylic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 815120 829737 100778506 100810088 101254008 101248455 4331547 9270306 100216599 100304277 103873312 103834926 100256776 100242027 18101054 18103734 11440920 11421844 100682506 123169042 123410210 123449737 107887413 107945794 106405661 106351933 5715601 8085012 8064309 102587698 102589351 102628904 102609713 100838918 100842898 107778837 107774559
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