Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8085170   L-lactate dehydrogenase B 
 zma-u.5   100282503   lactate dehydrogenase1 
 zma-u.5   100193279   Lactate/malate dehydrogenase family protein 
 osa-u.5   4328012   L-lactate dehydrogenase A 
 osa-u.5   4339856   L-lactate dehydrogenase B 
 ath-u.5   AT4G17260   Lactate/malate dehydrogenase family protein 
 gma-u.5   100818856   L-lactate dehydrogenase B 
 gma-u.5   100814897   L-lactate dehydrogenase B 
 gma-u.5   100803035   L-lactate dehydrogenase A 
 sly-u.5   ldh2   L-lactate dehydrogenase 
 sly-u.5   ldh1   L-lactate dehydrogenase 
 vvi-u.5   100250615   L-lactate dehydrogenase A 
 ppo-u.5   18093976   L-lactate dehydrogenase B 
 mtr-u.5   11427630   L-lactate dehydrogenase B 
 mtr-u.5   11406365   L-lactate dehydrogenase A 

close


Top 50 coexpressed genes to 8085170 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 8085170 (sbi-r.1 coexpression data)

CoexMap"8085170"


sbiLOC8085170 | Entrez gene ID : 8085170      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 2 1 3 2 1 1 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00010 [list] [network] Glycolysis / Gluconeogenesis (144 genes)
sbi00270 [list] [network] Cysteine and methionine metabolism (110 genes)
sbi00620 [list] [network] Pyruvate metabolism (106 genes)
sbi00640 [list] [network] Propanoate metabolism (34 genes)
GO BP
GO:0019752 [list] [network] carboxylic acid metabolic process  (549 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0004459 [list] [network] L-lactate dehydrogenase (NAD+) activity  (2 genes)  IEA  
Protein XP_002451354.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  mito 3,  cyto_nucl 3,  cyto_pero 3  (predict for XP_002451354.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for XP_002451354.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8085170

.
zma-u.5
for
100282503

.
zma-u.5
for
100193279

.
osa-u.5
for
4328012

.
osa-u.5
for
4339856

.
ath-u.5
for
AT4G17260

.
gma-u.5
for
100818856

.
gma-u.5
for
100814897

.
gma-u.5
for
100803035

.
sly-u.5
for
ldh2

.
sly-u.5
for
ldh1

.
vvi-u.5
for
100250615

.
ppo-u.5
for
18093976

.
mtr-u.5
for
11427630

.
mtr-u.5
for
11406365

.


Ortholog ID: 4102
Species ath gma gma sly sly osa osa zma zma bra bra vvi ppo mtr mtr tae hvu hvu ghi bna bna sbi sbi sot sot cit bdi nta nta
Symbol AT4G17260 LOC100814897 LOC100818856 ldh2 ldh1 LOC4328012 LOC4339856 LOC100282503 LOC100193279 LOC103868260 LOC103860904 LOC100250615 LOC18093976 LOC11406365 LOC11427630 LOC123131987 LOC123402652 LOC123429337 LOC121203531 LOC106445067 LOC106425371 LOC8085169 LOC8085170 LOC102604318 LDH-2 LOC102614633 LOC100846734 LOC107803141 LOC107777573
Function* Lactate/malate dehydrogenase family protein L-lactate dehydrogenase B L-lactate dehydrogenase B L-lactate dehydrogenase L-lactate dehydrogenase L-lactate dehydrogenase A L-lactate dehydrogenase B lactate dehydrogenase1 Lactate/malate dehydrogenase family protein L-lactate dehydrogenase B L-lactate dehydrogenase B L-lactate dehydrogenase A L-lactate dehydrogenase B L-lactate dehydrogenase A L-lactate dehydrogenase B L-lactate dehydrogenase A L-lactate dehydrogenase A L-lactate dehydrogenase B L-lactate dehydrogenase B L-lactate dehydrogenase B L-lactate dehydrogenase B-like L-lactate dehydrogenase L-lactate dehydrogenase B L-lactate dehydrogenase B lactate dehydrogenase-2 L-lactate dehydrogenase B L-lactate dehydrogenase B L-lactate dehydrogenase B L-lactate dehydrogenase B-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 4
ath00620 Pyruvate metabolism 3
ath01200 Carbon metabolism 3
ath01230 Biosynthesis of amino acids 3
ath00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 12
gma01200 Carbon metabolism 6
gma00030 Pentose phosphate pathway 4
gma01230 Biosynthesis of amino acids 4
gma00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 4
sly00510 N-Glycan biosynthesis 3
sly00513 Various types of N-glycan biosynthesis 3
sly04016 MAPK signaling pathway - plant 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00480 Glutathione metabolism 3
sly01250 Biosynthesis of nucleotide sugars 2
sly00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00010 Glycolysis / Gluconeogenesis 9
zma00620 Pyruvate metabolism 5
zma00270 Cysteine and methionine metabolism 3
zma00030 Pentose phosphate pathway 3
zma00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00010 Glycolysis / Gluconeogenesis 4
zma00270 Cysteine and methionine metabolism 3
zma00620 Pyruvate metabolism 3
zma00640 Propanoate metabolism 2
zma02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
bra00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00010 Glycolysis / Gluconeogenesis 7
bra01200 Carbon metabolism 6
bra01230 Biosynthesis of amino acids 6
bra00030 Pentose phosphate pathway 5
bra00051 Fructose and mannose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00330 Arginine and proline metabolism 3
vvi00250 Alanine, aspartate and glutamate metabolism 2
vvi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 4
ppo00053 Ascorbate and aldarate metabolism 3
ppo00520 Amino sugar and nucleotide sugar metabolism 3
ppo01240 Biosynthesis of cofactors 3
ppo01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 6
mtr00620 Pyruvate metabolism 5
mtr00071 Fatty acid degradation 3
mtr00350 Tyrosine metabolism 3
mtr00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 16
tae00620 Pyruvate metabolism 6
tae00071 Fatty acid degradation 4
tae00350 Tyrosine metabolism 4
tae00592 alpha-Linolenic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 4
ghi00270 Cysteine and methionine metabolism 4
ghi00620 Pyruvate metabolism 4
ghi00640 Propanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 4
bna00270 Cysteine and methionine metabolism 4
bna00620 Pyruvate metabolism 4
bna00640 Propanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 4
bna00270 Cysteine and methionine metabolism 4
bna00620 Pyruvate metabolism 4
bna00640 Propanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00010 Glycolysis / Gluconeogenesis 4
sbi00270 Cysteine and methionine metabolism 3
sbi00620 Pyruvate metabolism 2
sbi00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00250 Alanine, aspartate and glutamate metabolism 4
sbi00410 beta-Alanine metabolism 4
sbi00430 Taurine and hypotaurine metabolism 4
sbi00650 Butanoate metabolism 4
sbi00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
sot04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 4
sot04136 Autophagy - other 4
sot04382 Cornified envelope formation 4
sot00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 4
cit00010 Glycolysis / Gluconeogenesis 4
cit00360 Phenylalanine metabolism 2
cit04075 Plant hormone signal transduction 2
cit00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00010 Glycolysis / Gluconeogenesis 6
bdi01200 Carbon metabolism 4
bdi01230 Biosynthesis of amino acids 4
bdi00620 Pyruvate metabolism 3
bdi00350 Tyrosine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 6
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
nta01230 Biosynthesis of amino acids 4
nta00940 Phenylpropanoid biosynthesis 4
nta00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 7
nta01230 Biosynthesis of amino acids 7
nta01200 Carbon metabolism 5
nta03018 RNA degradation 3
nta04820 Cytoskeleton in muscle cells 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827440 100814897 100818856 101263923 101252012 4328012 4339856 100282503 100193279 103868260 103860904 100250615 18093976 11406365 11427630 123131987 123402652 123429337 121203531 106445067 106425371 8085169 8085170 102604318 102577778 102614633 100846734 107803141 107777573
The preparation time of this page was 0.1 [sec].