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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8086192   upstream activation factor subunit spp27 
 zma-u.5   100281035   uncharacterized LOC100281035 
 zma-u.5   100281818   uncharacterized LOC100281818 
 osa-u.5   107275975   upstream activation factor subunit spp27 
 tae-r.2   123105128   upstream activation factor subunit spp27 
 tae-r.2   123113420   upstream activation factor subunit spp27 
 tae-r.2   123122935   upstream activation factor subunit spp27 
 hvu-r.1   123452374   upstream activation factor subunit spp27-like 
 bdi-r.1   100831587   upstream activation factor subunit spp27 
 ath-u.5   AT3G19080   SWIB complex BAF60b domain-containing protein 
 ath-u.5   AT1G49520   SWIB complex BAF60b domain-containing protein 
 gma-u.5   100786835   upstream activation factor subunit spp27 
 gma-u.5   100784838   upstream activation factor subunit spp27 
 sly-u.5   101263870   protein TRI1-like 
 sly-u.5   101243645   SWIB/MDM2 domain-containing protein 
 bra-r.6   103869495   uncharacterized LOC103869495 
 vvi-u.5   100852962   upstream activation factor subunit spp27 
 ppo-u.5   18097831   protein TRI1 
 ppo-u.5   7480496   protein TRI1 
 ppo-u.5   7490004   protein TRI1 
 mtr-u.5   11421065   upstream activation factor subunit spp27 
 ghi-r.1   107913199   protein TRI1 
 ghi-r.1   121214848   trichohyalin 
 ghi-r.1   107927955   YTH domain-containing protein 1 
 bna-r.1   106451907   zinc finger CCCH domain-containing protein 19-like 
 bna-r.1   106410429   uncharacterized LOC106410429 
 bna-r.1   106451908   zinc finger CCCH domain-containing protein 19 
 sot-r.1   102599905   upstream activation factor subunit spp27-like 
 cit-r.1   102611580   protein TRI1 
 cit-r.1   102610327   upstream activation factor subunit spp27-like 
 nta-r.1   107777697   upstream activation factor subunit UAF30 
 nta-r.1   107776037   uncharacterized LOC107776037 
 nta-r.1   107808356   upstream activation factor subunit UAF30-like 
 cre-r.1   CHLRE_02g118250v5   uncharacterized protein 

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Top 50 coexpressed genes to 8086192 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8086192 (sbi-r.1 coexpression data)

CoexMap"8086192"


sbiLOC8086192 | Entrez gene ID : 8086192      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 2 1 3 1 1 2 2 2 1 1 3 1 3 3 1 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
Protein XP_002466401.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  cysk 1,  cyto_plas 1  (predict for XP_002466401.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002466401.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8086192
zma-u.5
for
100281035
zma-u.5
for
100281818
osa-u.5
for
107275975
tae-r.2
for
123105128
tae-r.2
for
123113420
tae-r.2
for
123122935
hvu-r.1
for
123452374
bdi-r.1
for
100831587
ath-u.5
for
AT3G19080
ath-u.5
for
AT1G49520
gma-u.5
for
100786835
gma-u.5
for
100784838
sly-u.5
for
101263870
sly-u.5
for
101243645
bra-r.6
for
103869495
vvi-u.5
for
100852962
ppo-u.5
for
18097831
ppo-u.5
for
7480496
ppo-u.5
for
7490004
mtr-u.5
for
11421065
ghi-r.1
for
107913199
ghi-r.1
for
121214848
ghi-r.1
for
107927955
bna-r.1
for
106451907
bna-r.1
for
106410429
bna-r.1
for
106451908
sot-r.1
for
102599905
cit-r.1
for
102611580
cit-r.1
for
102610327
nta-r.1
for
107777697
nta-r.1
for
107776037
nta-r.1
for
107808356
cre-r.1
for
CHLRE_02g118250v5


Ortholog ID: 5521
Species sbi zma zma osa tae tae tae hvu bdi ath ath gma gma sly sly bra vvi ppo ppo ppo mtr ghi ghi ghi bna bna bna sot cit cit nta nta nta cre
Symbol LOC8086192 LOC100281035 LOC100281818 LOC107275975 LOC123105128 LOC123113420 LOC123122935 LOC123452374 LOC100831587 AT3G19080 AT1G49520 LOC100786835 LOC100784838 LOC101263870 LOC101243645 LOC103869495 LOC100852962 LOC18097831 LOC7480496 LOC7490004 LOC11421065 LOC121214848 LOC107927955 LOC107897105 LOC106451907 LOC106410429 LOC106451908 LOC102599905 LOC102611580 LOC102610327 LOC107776037 LOC107808356 LOC107769217 CHLRE_02g118250v5
Function* upstream activation factor subunit spp27 uncharacterized LOC100281035 uncharacterized LOC100281818 upstream activation factor subunit spp27 upstream activation factor subunit spp27 upstream activation factor subunit spp27 upstream activation factor subunit spp27 upstream activation factor subunit spp27-like upstream activation factor subunit spp27 SWIB complex BAF60b domain-containing protein SWIB complex BAF60b domain-containing protein upstream activation factor subunit spp27 upstream activation factor subunit spp27 protein TRI1-like SWIB/MDM2 domain-containing protein uncharacterized LOC103869495 upstream activation factor subunit spp27 protein TRI1 protein TRI1 protein TRI1 upstream activation factor subunit spp27 trichohyalin YTH domain-containing protein 1 upstream activation factor subunit UAF30 zinc finger CCCH domain-containing protein 19-like uncharacterized LOC106410429 zinc finger CCCH domain-containing protein 19 upstream activation factor subunit spp27-like protein TRI1 upstream activation factor subunit spp27-like uncharacterized LOC107776037 upstream activation factor subunit UAF30-like upstream activation factor subunit UAF30 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 9
zma03015 mRNA surveillance pathway 3
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 2
tae00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 3
tae00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra04120 Ubiquitin mediated proteolysis 3
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 3
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
sot04130 SNARE interactions in vesicular transport 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 5
nta00290 Valine, leucine and isoleucine biosynthesis 5
nta01200 Carbon metabolism 5
nta01230 Biosynthesis of amino acids 5
nta00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8086192 100281035 100281818 107275975 123105128 123113420 123122935 123452374 100831587 821442 841376 100786835 100784838 101263870 101243645 103869495 100852962 18097831 7480496 7490004 11421065 121214848 107927955 107897105 106451907 106410429 106451908 102599905 102611580 102610327 107776037 107808356 107769217 5727990
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