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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   RNS1   ribonuclease 1 
 ath-r.7   RNS1   ribonuclease 1 
 ath-m.9   RNS1   ribonuclease 1 
 ath-e.2   RNS1   ribonuclease 1 
 ath-m.4.bio   RNS1   ribonuclease 1 
 ath-m.4.hor   RNS1   ribonuclease 1 
 ath-m.4.lig   RNS1   ribonuclease 1 
 ath-m.4.str   RNS1   ribonuclease 1 
 ath-m.4.tis   RNS1   ribonuclease 1 
 ath-u.5   AT1G14220   Ribonuclease T2 family protein 
 ath-u.5   RNS3   ribonuclease 3 
 ath-u.5   AT1G14210   Ribonuclease T2 family protein 
 bra-r.6   103875452   ribonuclease 1 
 bra-r.6   103829206   ribonuclease 3 
 bra-r.6   103842993   ribonuclease 1 
 bna-r.1   106380914   ribonuclease 1-like 
 bna-r.1   111203334   ribonuclease 1 
 ghi-r.1   107940648   ribonuclease 3 
 ghi-r.1   107918619   ribonuclease 3 
 cit-r.1   102615337   extracellular ribonuclease LE-like 
 cit-r.1   102615052   ribonuclease 3 
 gma-u.5   100527255   uncharacterized LOC100527255 
 gma-u.5   100778239   ribonuclease 3 
 vvi-u.5   100249919   extracellular ribonuclease LE 
 ppo-u.5   7460690   ribonuclease 1 
 ppo-u.5   7460691   ribonuclease 3 
 mtr-u.5   11422141   ribonuclease 1 
 mtr-u.5   11417570   ribonuclease 1 
 sly-u.5   rnalx   intracellular ribonuclease LX 
 sly-u.5   RNALE   ribonuclease T2 
 sot-r.1   102600511   extracellular ribonuclease LE 
 sot-r.1   102592540   intracellular ribonuclease LX-like 
 sot-r.1   102600839   intracellular ribonuclease LX 
 nta-r.1   107813432   extracellular ribonuclease LE-like 
 nta-r.1   107822186   intracellular ribonuclease LX-like 
 nta-r.1   107811341   extracellular ribonuclease LE-like 
 osa-u.5   4347708   ribonuclease 3 
 osa-u.5   4345656   extracellular ribonuclease LE 
 zma-u.5   100284932   ribonuclease 1 
 zma-u.5   100192110   uncharacterized LOC100192110 
 tae-r.2   543132   ribonuclease 1 
 tae-r.2   123134706   ribonuclease 1 
 hvu-r.1   123421387   ribonuclease 3-like 
 hvu-r.1   123430111   ribonuclease 3-like 
 sbi-r.1   8063515   ribonuclease 1 
 sbi-r.1   8063317   ribonuclease 3 
 sbi-r.1   8077825   ribonuclease 1 
 bdi-r.1   100833857   ribonuclease 1 
 bdi-r.1   100838612   ribonuclease 1 
 cre-r.1   CHLRE_06g306550v5   uncharacterized protein 

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Top 50 coexpressed genes to RNS1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RNS1 (ath-u.5 coexpression data)

CoexMap"814828"


athRNS1 | Entrez gene ID : 814828      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 12 3 2 2 2 2 1 2 2 2 3 3 2 2 2 2 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009718 [list] [network] anthocyanin-containing compound biosynthetic process  (18 genes)  IMP  
GO:0009867 [list] [network] jasmonic acid mediated signaling pathway  (74 genes)  IEP  
GO:0016036 [list] [network] cellular response to phosphate starvation  (116 genes)  IEP  
GO:0009611 [list] [network] response to wounding  (271 genes)  IEP  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (504 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  IDA ISM  
GO MF
GO:0004540 [list] [network] RNA nuclease activity  (125 genes)  IDA  
Protein NP_178399.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 6,  vacu 3  (predict for NP_178399.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_178399.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
RNS1
ath-r.7
for
RNS1
ath-m.9
for
RNS1
ath-e.2
for
RNS1
ath-m.4.bio
for
RNS1
ath-m.4.hor
for
RNS1
ath-m.4.lig
for
RNS1
ath-m.4.str
for
RNS1
ath-m.4.tis
for
RNS1
ath-u.5
for
AT1G14220
ath-u.5
for
RNS3
ath-u.5
for
AT1G14210
bra-r.6
for
103875452
bra-r.6
for
103829206
bra-r.6
for
103842993
bna-r.1
for
106380914
bna-r.1
for
111203334
ghi-r.1
for
107940648
ghi-r.1
for
107918619
cit-r.1
for
102615337
cit-r.1
for
102615052
gma-u.5
for
100527255
gma-u.5
for
100778239
vvi-u.5
for
100249919
ppo-u.5
for
7460690
ppo-u.5
for
7460691
mtr-u.5
for
11422141
mtr-u.5
for
11417570
sly-u.5
for
rnalx
sly-u.5
for
RNALE
sot-r.1
for
102600511
sot-r.1
for
102592540
sot-r.1
for
102600839
nta-r.1
for
107813432
nta-r.1
for
107822186
nta-r.1
for
107811341
osa-u.5
for
4347708
osa-u.5
for
4345656
zma-u.5
for
100284932
zma-u.5
for
100192110
tae-r.2
for
543132
tae-r.2
for
123134706
hvu-r.1
for
123421387
hvu-r.1
for
123430111
sbi-r.1
for
8063515
sbi-r.1
for
8063317
sbi-r.1
for
8077825
bdi-r.1
for
100833857
bdi-r.1
for
100838612
cre-r.1
for
CHLRE_06g306550v5


Ortholog ID: 892
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi ppo ppo mtr mtr mtr sly sot sot nta nta nta osa osa zma zma tae tae hvu hvu sbi sbi sbi bdi bdi cre
Symbol AT1G14220 RNS3 AT1G14210 LOC103875452 LOC103842986 LOC103853966 LOC111203334 LOC106415884 LOC106352194 LOC107940648 LOC107918619 LOC107940649 LOC102615337 LOC102615052 LOC100527255 LOC100306447 LOC100782011 LOC100249919 LOC7460690 LOC7460691 LOC11422141 LOC11412791 LOC25494640 RNALE LOC102600511 LOC102592540 LOC107813432 LOC107811341 LOC107759406 LOC4347708 LOC4345656 LOC100284932 LOC100192110 LOC123048962 LOC123041280 LOC123421387 LOC123425196 LOC8063515 LOC8063317 LOC8077825 LOC100833857 LOC100838612 CHLRE_06g306550v5
Function* Ribonuclease T2 family protein ribonuclease 3 Ribonuclease T2 family protein ribonuclease 1 ribonuclease 3 ribonuclease 1 ribonuclease 1 ribonuclease 1-like ribonuclease 1 ribonuclease 3 ribonuclease 3 ribonuclease 1 extracellular ribonuclease LE-like ribonuclease 3 uncharacterized LOC100527255 putative ribonuclease T2 ribonuclease 1 extracellular ribonuclease LE ribonuclease 1 ribonuclease 3 ribonuclease 1 ribonuclease 3 ribonuclease 3 ribonuclease T2 extracellular ribonuclease LE intracellular ribonuclease LX-like extracellular ribonuclease LE-like extracellular ribonuclease LE-like intracellular ribonuclease LX ribonuclease 3 extracellular ribonuclease LE ribonuclease 1 uncharacterized LOC100192110 ribonuclease 1 ribonuclease 3 ribonuclease 3-like ribonuclease 1-like ribonuclease 1 ribonuclease 3 ribonuclease 1 ribonuclease 1 ribonuclease 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 4
ath04075 Plant hormone signal transduction 4
ath00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00073 Cutin, suberine and wax biosynthesis 2
bra00062 Fatty acid elongation 2
bra01212 Fatty acid metabolism 2
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 6
bna00640 Propanoate metabolism 6
bna01200 Carbon metabolism 6
bna00061 Fatty acid biosynthesis 4
bna01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00460 Cyanoamino acid metabolism 2
cit00500 Starch and sucrose metabolism 2
cit00999 Biosynthesis of various plant secondary metabolites 2
cit00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00740 Riboflavin metabolism 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00520 Amino sugar and nucleotide sugar metabolism 3
ppo04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 2
mtr00940 Phenylpropanoid biosynthesis 2
mtr00562 Inositol phosphate metabolism 2
mtr00564 Glycerophospholipid metabolism 2
mtr00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 3
sot04016 MAPK signaling pathway - plant 2
sot04075 Plant hormone signal transduction 2
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 3
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 4
nta00566 Sulfoquinovose metabolism 4
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 4
nta00566 Sulfoquinovose metabolism 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00999 Biosynthesis of various plant secondary metabolites 3
nta00460 Cyanoamino acid metabolism 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 2
osa00240 Pyrimidine metabolism 2
osa01232 Nucleotide metabolism 2
osa00591 Linoleic acid metabolism 2
osa00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 6
sbi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00562 Inositol phosphate metabolism 2
sbi00564 Glycerophospholipid metabolism 2
sbi00565 Ether lipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837983 839225 837982 103875452 103842986 103853966 111203334 106415884 106352194 107940648 107918619 107940649 102615337 102615052 100527255 100306447 100782011 100249919 7460690 7460691 11422141 11412791 25494640 544098 102600511 102592540 107813432 107811341 107759406 4347708 4345656 100284932 100192110 123048962 123041280 123421387 123425196 8063515 8063317 8077825 100833857 100838612 5716875
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