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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   UPS2   ureide permease 2 
 ath-r.7   UPS2   ureide permease 2 
 ath-m.9   UPS2   ureide permease 2 
 ath-e.2   UPS2   ureide permease 2 
 ath-m.4.bio   UPS2   ureide permease 2 
 ath-m.4.hor   UPS2   ureide permease 2 
 ath-m.4.lig   UPS2   ureide permease 2 
 ath-m.4.str   UPS2   ureide permease 2 
 ath-m.4.tis   UPS2   ureide permease 2 
 ath-u.5   UPS1   ureide permease 1 
 ath-u.5   UPS5   ureide permease 5 
 gma-u.5   100802349   ureide permease 1 
 gma-u.5   100801814   probable ureide permease A3 
 gma-u.5   100794172   probable ureide permease A3 
 vvi-u.5   100252466   ureide permease 1 
 ppo-u.5   7471057   ureide permease 1 
 ppo-u.5   18101466   ureide permease 1 
 mtr-u.5   11425933   ureide permease 2 
 mtr-u.5   11436395   ureide permease 1 
 mtr-u.5   11433129   ureide permease 1 
 sly-u.5   101268760   ureide permease 1 
 sly-u.5   101257994   ureide permease 1-like 
 zma-u.5   100502471   uncharacterized LOC100502471 
 zma-u.5   100272659   uncharacterized LOC100272659 

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Top 50 coexpressed genes to UPS2 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to UPS2 (ath-u.5 coexpression data)

CoexMap"814882"


athUPS2 | Entrez gene ID : 814882      
Species ath gma vvi ppo mtr sly zma bdi hvu bra cit bna sbi ghi osa sot nta cre tae
Paralog 11 3 1 2 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015720 [list] [network] allantoin transport  (3 genes)  IDA  
GO:0043100 [list] [network] pyrimidine nucleobase salvage  (4 genes)  TAS  
GO:0015857 [list] [network] uracil transport  (5 genes)  IDA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
GO:0015505 [list] [network] uracil:monoatomic cation symporter activity  (1 genes)  IGI  
GO:0005274 [list] [network] allantoin:proton symporter activity  (3 genes)  IDA  
GO:0015210 [list] [network] uracil transmembrane transporter activity  (6 genes)  IDA  
Protein NP_001077874.1 [sequence] [blastp]
NP_001324119.1 [sequence] [blastp]
NP_001324120.1 [sequence] [blastp]
NP_001324121.1 [sequence] [blastp]
NP_178451.2 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  chlo 2,  plas 2,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001077874.1)
chlo 3,  cyto 3,  plas 2,  cyto_E.R. 2  (predict for NP_001324119.1)
vacu 9,  plas 1,  extr 1  (predict for NP_001324120.1)
vacu 9,  plas 1,  extr 1  (predict for NP_001324121.1)
extr 4,  chlo 2,  plas 2,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_178451.2)
Subcellular
localization
TargetP
scret 9  (predict for NP_001077874.1)
scret 9  (predict for NP_001324119.1)
scret 7  (predict for NP_001324120.1)
scret 7  (predict for NP_001324121.1)
scret 9  (predict for NP_178451.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
UPS2
ath-r.7
for
UPS2
ath-m.9
for
UPS2
ath-e.2
for
UPS2
ath-m.4.bio
for
UPS2
ath-m.4.hor
for
UPS2
ath-m.4.lig
for
UPS2
ath-m.4.str
for
UPS2
ath-m.4.tis
for
UPS2
ath-u.5
for
UPS1
ath-u.5
for
UPS5
gma-u.5
for
100802349
gma-u.5
for
100801814
gma-u.5
for
100794172
vvi-u.5
for
100252466
ppo-u.5
for
7471057
ppo-u.5
for
18101466
mtr-u.5
for
11425933
mtr-u.5
for
11436395
mtr-u.5
for
11433129
sly-u.5
for
101268760
sly-u.5
for
101257994
zma-u.5
for
100502471
zma-u.5
for
100272659


Ortholog ID: 2372
Species ath bra bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta zma zma tae hvu sbi sbi bdi bdi
Symbol UPS5 LOC103853941 LOC103839401 LOC106426974 LOC125575030 LOC107918698 LOC107918444 LOC102609503 LOC100801814 LOC100802349 LOC100252466 LOC7471057 LOC18101466 LOC11436395 LOC11425933 LOC101257994 LOC101268760 LOC102597636 LOC102595306 LOC107785001 LOC107813787 LOC100272659 LOC100502471 LOC123102727 LOC123452973 LOC8064577 LOC110429543 LOC100839431 LOC100842060
Function* ureide permease 5 ureide permease 1 ureide permease 1 ureide permease 1-like ureide permease 1-like ureide permease 1 ureide permease 1 ureide permease 1-like probable ureide permease A3 ureide permease 1 ureide permease 1 ureide permease 1 ureide permease 1 ureide permease 1 ureide permease 2 ureide permease 1-like ureide permease 1 ureide permease 1 ureide permease 1-like ureide permease 1 ureide permease 1 uncharacterized LOC100272659 uncharacterized LOC100502471 ureide permease 1 ureide permease 1-like ureide permease 1 ureide permease 1-like ureide permease 1 ureide permease 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 4
ghi00051 Fructose and mannose metabolism 4
ghi00920 Sulfur metabolism 2
ghi00190 Oxidative phosphorylation 2
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00920 Sulfur metabolism 2
vvi01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00261 Monobactam biosynthesis 2
mtr00300 Lysine biosynthesis 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04145 Phagosome 2
mtr04517 IgSF CAM signaling 2
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
sot00330 Arginine and proline metabolism 2
sot01200 Carbon metabolism 2
sot00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 3
zma04082 Neuroactive ligand signaling 2
zma04148 Efferocytosis 2
zma00500 Starch and sucrose metabolism 2
zma00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00999 Biosynthesis of various plant secondary metabolites 2
zma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00920 Sulfur metabolism 2
sbi01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839185 103853941 103839401 106426974 125575030 107918698 107918444 102609503 100801814 100802349 100252466 7471057 18101466 11436395 11425933 101257994 101268760 102597636 102595306 107785001 107813787 100272659 100502471 123102727 123452973 8064577 110429543 100839431 100842060
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