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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   DRD1   SNF2 domain-containing protein / helicase domain-containing protein 
 ath-r.7   DRD1   SNF2 domain-containing protein / helicase domain-containing protein 
 ath-m.9   DRD1   SNF2 domain-containing protein / helicase domain-containing protein 
 ath-e.2   DRD1   SNF2 domain-containing protein / helicase domain-containing protein 
 ath-m.4.bio   DRD1   SNF2 domain-containing protein / helicase domain-containing protein 
 ath-m.4.hor   DRD1   SNF2 domain-containing protein / helicase domain-containing protein 
 ath-m.4.lig   DRD1   SNF2 domain-containing protein / helicase domain-containing protein 
 ath-m.4.str   DRD1   SNF2 domain-containing protein / helicase domain-containing protein 
 ath-m.4.tis   DRD1   SNF2 domain-containing protein / helicase domain-containing protein 
 gma-u.5   100780454   protein CHROMATIN REMODELING 35 
 vvi-u.5   100248561   protein CHROMATIN REMODELING 35 
 vvi-u.5   100260281   protein CHROMATIN REMODELING 35 
 vvi-u.5   100243495   protein CHROMATIN REMODELING 35 
 ppo-u.5   7456356   protein CHROMATIN REMODELING 35 
 mtr-u.5   25501071   protein CHROMATIN REMODELING 35 
 mtr-u.5   25488181   protein CHROMATIN REMODELING 35 
 sly-u.5   101266874   protein CHROMATIN REMODELING 35 
 osa-u.5   107277180   protein CHROMATIN REMODELING 35 
 osa-u.5   9272476   protein CHROMATIN REMODELING 35 
 osa-u.5   4343066   protein CHROMATIN REMODELING 35 
 zma-u.5   103641317   protein CHROMATIN REMODELING 35 
 zma-u.5   100277391   Protein CHROMATIN REMODELING 35 

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Top 50 coexpressed genes to DRD1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to DRD1 (ath-u.5 coexpression data)

CoexMap"816136"


athDRD1 | Entrez gene ID : 816136      
Species ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 9 1 3 1 2 1 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03440 [list] [network] Homologous recombination (60 genes)
GO BP
GO:0035563 [list] [network] positive regulation of chromatin binding  (1 genes)  IMP  
GO:0071360 [list] [network] cellular response to exogenous dsRNA  (1 genes)  IMP  
GO:0090310 [list] [network] negative regulation of DNA methylation-dependent heterochromatin formation  (2 genes)  IMP  
GO:0030422 [list] [network] siRNA processing  (31 genes)  IGI  
GO:0080188 [list] [network] gene silencing by siRNA-directed DNA methylation  (44 genes)  IMP  
GO:0006346 [list] [network] DNA methylation-dependent constitutive heterochromatin formation  (53 genes)  IMP  
GO:0070828 [list] [network] heterochromatin organization  (77 genes)  IMP  
GO:0040029 [list] [network] epigenetic regulation of gene expression  (174 genes)  IMP  
GO:0050832 [list] [network] defense response to fungus  (282 genes)  IMP  
GO CC
GO:0090577 [list] [network] RNA polymerase IV transcription regulator complex  (1 genes)  IMP  
GO:0005721 [list] [network] pericentric heterochromatin  (2 genes)  IMP  
GO:0000419 [list] [network] RNA polymerase V complex  (21 genes)  IMP  
GO:0005730 [list] [network] nucleolus  (394 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (21 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001324537.1 [sequence] [blastp]
NP_179232.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  chlo 1,  E.R. 1,  cysk 1  (predict for NP_001324537.1)
cyto 4,  chlo 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_179232.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001324537.1)
other 8  (predict for NP_179232.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
DRD1

.
ath-r.7
for
DRD1

.
ath-m.9
for
DRD1

.
ath-e.2
for
DRD1

.
ath-m.4.bio
for
DRD1

.
ath-m.4.hor
for
DRD1

.
ath-m.4.lig
for
DRD1

.
ath-m.4.str
for
DRD1

.
ath-m.4.tis
for
DRD1

.
gma-u.5
for
100780454

.
vvi-u.5
for
100248561

.
vvi-u.5
for
100260281

.
vvi-u.5
for
100243495

.
ppo-u.5
for
7456356

.
mtr-u.5
for
25501071

.
mtr-u.5
for
25488181

.
sly-u.5
for
101266874

.
osa-u.5
for
107277180

.
osa-u.5
for
9272476

.
osa-u.5
for
4343066

.
zma-u.5
for
103641317

.
zma-u.5
for
100277391

.


Ortholog ID: 4856
Species ath gma sly osa osa zma zma bra vvi vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol DRD1 LOC100780454 LOC101266874 LOC4343066 LOC107277180 LOC100277391 LOC103641317 LOC103860454 LOC100243495 LOC100260281 LOC7456356 LOC25488181 LOC25501071 LOC123104662 LOC123052194 LOC123451768 LOC123425442 LOC107928073 LOC107945018 LOC106429587 LOC106439846 LOC8076538 LOC102588195 LOC102625289 LOC100828181 LOC107822440 LOC107815409
Function* SNF2 domain-containing protein / helicase domain-containing protein protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 Protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 uncharacterized LOC123104662 uncharacterized LOC123052194 protein CHROMATIN REMODELING 35-like protein CHROMATIN REMODELING 35-like protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35-like protein CHROMATIN REMODELING 35 protein chromatin remodeling 35-like protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma03440 Homologous recombination 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 4
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03440 Homologous recombination 2
bdi03060 Protein export 2
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03040 Spliceosome 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03040 Spliceosome 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816136 100780454 101266874 4343066 107277180 100277391 103641317 103860454 100243495 100260281 7456356 25488181 25501071 123104662 123052194 123451768 123425442 107928073 107945018 106429587 106439846 8076538 102588195 102625289 100828181 107822440 107815409
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