ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	PRORP2	proteinaceous RNase P 2
ath-r.7	PRORP2	proteinaceous RNase P 2
ath-e.2	PRORP2	proteinaceous RNase P 2
ath-u.5	PRORP1	proteinaceous RNase P 1
ath-u.5	PRORP3	proteinaceous RNase P 3
ath-u.5	AT5G60430	antiporter/ drug transporter
gma-u.5	100786913	proteinaceous RNase P 1, chloroplastic/mitochondrial
gma-u.5	100787851	proteinaceous RNase P 1, chloroplastic/mitochondrial
gma-u.5	100804176	proteinaceous RNase P 2
vvi-u.5	100242208	proteinaceous RNase P 1, chloroplastic/mitochondrial
vvi-u.5	100855405	proteinaceous RNase P 2
vvi-u.5	100263566	proteinaceous RNase P 2
ppo-u.5	18108898	proteinaceous RNase P 2
ppo-u.5	7496601	proteinaceous RNase P 1, chloroplastic/mitochondrial
ppo-u.5	7491959	proteinaceous RNase P 1, chloroplastic/mitochondrial
mtr-u.5	112417117	proteinaceous RNase P 2
mtr-u.5	11433451	proteinaceous RNase P 1, chloroplastic/mitochondrial
mtr-u.5	11406549	proteinaceous RNase P 2
sly-u.5	101247626	proteinaceous RNase P 1, chloroplastic/mitochondrial
sly-u.5	101248213	proteinaceous RNase P 1, chloroplastic/mitochondrial
sly-u.5	101249830	proteinaceous RNase P 2-like
osa-u.5	9266673	proteinaceous RNase P 1, chloroplastic/mitochondrial
osa-u.5	4324012	proteinaceous RNase P 2
osa-u.5	4328994	proteinaceous RNase P 1, chloroplastic/mitochondrial
zma-u.5	100283973	antiporter/ drug transporter/ transporter
zma-u.5	100281164	uncharacterized LOC100281164
zma-u.5	103626926	proteinaceous RNase P 1, chloroplastic/mitochondrial

Top 50 coexpressed genes to PRORP2 (ath-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to PRORP2 (ath-u.5 coexpression data)

CoexMap"816166"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0043144 [list] [network] sno(s)RNA processing	(3 genes)	IMP
GO:0001682 [list] [network] tRNA 5'-leader removal	(4 genes)	IDA
GO:0006397 [list] [network] mRNA processing	(185 genes)	IMP

GO CC

GO:0009507 [list] [network] chloroplast	(5014 genes)	ISM
GO:0005634 [list] [network] nucleus	(10367 genes)	IDA ISM

GO MF

GO:0004526 [list] [network] ribonuclease P activity

(5 genes)

IDA

Protein

NP_001324533.1 [sequence] [blastp]
NP_179256.3 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 3, nucl 1, cyto_pero 1, cyto_E.R. 1	(predict for NP_001324533.1)
nucl 6, cyto 2, chlo 1, mito 1, cysk 1, chlo_mito 1	(predict for NP_179256.3)

Subcellular
localization
TargetP

other 6	(predict for NP_001324533.1)
chlo 7, other 3	(predict for NP_179256.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for PRORP2	ath-r.7 for PRORP2	ath-e.2 for PRORP2	ath-u.5 for PRORP1	ath-u.5 for PRORP3	ath-u.5 for AT5G60430	gma-u.5 for 100786913	gma-u.5 for 100787851	gma-u.5 for 100804176	vvi-u.5 for 100242208	vvi-u.5 for 100855405	vvi-u.5 for 100263566	ppo-u.5 for 18108898	ppo-u.5 for 7496601	ppo-u.5 for 7491959	mtr-u.5 for 112417117	mtr-u.5 for 11433451	mtr-u.5 for 11406549	sly-u.5 for 101247626	sly-u.5 for 101248213	sly-u.5 for 101249830	osa-u.5 for 9266673	osa-u.5 for 4324012	osa-u.5 for 4328994	zma-u.5 for 100283973	zma-u.5 for 100281164	zma-u.5 for 103626926

Ortholog

Ortholog ID: 1651

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

PRORP2

Function^*

proteinaceous RNase P 2

antiporter/ drug transporter

proteinaceous RNase P 3