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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   emb1345   Transducin/WD40 repeat-like superfamily protein 
 ath-r.7   emb1345   Transducin/WD40 repeat-like superfamily protein 
 ath-m.9   emb1345   Transducin/WD40 repeat-like superfamily protein 
 ath-e.2   emb1345   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.bio   emb1345   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.hor   emb1345   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.lig   emb1345   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.str   emb1345   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.tis   emb1345   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100778826   cytosolic iron-sulfur protein assembly 1-like protein 
 vvi-u.5   100256192   protein CIA1 
 ppo-u.5   7458232   protein CIA1 
 ppo-u.5   7478508   protein CIA1 
 mtr-u.5   11427181   protein CIA1 
 sly-u.5   101262559   protein CIA1 
 osa-u.5   4342847   protein CIA1 
 zma-u.5   103632169   protein CIA1 

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Top 50 coexpressed genes to emb1345 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to emb1345 (ath-u.5 coexpression data)

CoexMap"817147"


athemb1345 | Entrez gene ID : 817147      
Species ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 9 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016226 [list] [network] iron-sulfur cluster assembly  (26 genes)  IGI  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  NAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001031421.1 [sequence] [blastp]
NP_565615.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001031421.1)
nucl 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_565615.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_001031421.1)
other 7,  chlo 3  (predict for NP_565615.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
emb1345

.
ath-r.7
for
emb1345

.
ath-m.9
for
emb1345

.
ath-e.2
for
emb1345

.
ath-m.4.bio
for
emb1345

.
ath-m.4.hor
for
emb1345

.
ath-m.4.lig
for
emb1345

.
ath-m.4.str
for
emb1345

.
ath-m.4.tis
for
emb1345

.
gma-u.5
for
100778826

.
vvi-u.5
for
100256192

.
ppo-u.5
for
7458232

.
ppo-u.5
for
7478508

.
mtr-u.5
for
11427181

.
sly-u.5
for
101262559

.
osa-u.5
for
4342847

.
zma-u.5
for
103632169

.


Ortholog ID: 6228
Species ath gma sly osa zma bra vvi ppo ppo mtr tae hvu ghi ghi bna cre sbi sot sot cit bdi nta nta
Symbol emb1345 LOC100778826 LOC101262559 LOC4342847 LOC103632169 LOC103842163 LOC100256192 LOC7458232 LOC7478508 LOC11427181 LOC123148917 LOC123409832 LOC107928223 LOC107925678 LOC106368545 CHLRE_08g374400v5 LOC8054417 LOC102585671 LOC102594392 LOC102625463 LOC100828154 LOC107791693 LOC107809969
Function* Transducin/WD40 repeat-like superfamily protein cytosolic iron-sulfur protein assembly 1-like protein protein CIA1 protein CIA1 protein CIA1 protein CIA1 protein CIA1 protein CIA1 protein CIA1 protein CIA1 protein CIA1 protein CIA1 protein CIA1 protein CIA1 protein CIA1 uncharacterized protein protein CIA1 protein CIA1-like protein CIA1-like protein CIA1 protein CIA1 protein CIA1 protein CIA1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03013 Nucleocytoplasmic transport 4
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
gma04141 Protein processing in endoplasmic reticulum 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 2
osa01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 7
bra00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo03013 Nucleocytoplasmic transport 2
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
hvu04141 Protein processing in endoplasmic reticulum 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 6
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 5
bdi03040 Spliceosome 4
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817147 100778826 101262559 4342847 103632169 103842163 100256192 7458232 7478508 11427181 123148917 123409832 107928223 107925678 106368545 5719967 8054417 102585671 102594392 102625463 100828154 107791693 107809969
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