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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT2G27790   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-r.7   AT2G27790   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.9   AT2G27790   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-e.2   AT2G27790   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.bio   AT2G27790   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.hor   AT2G27790   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.lig   AT2G27790   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.str   AT2G27790   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.tis   AT2G27790   RNA-binding (RRM/RBD/RNP motifs) family protein 
 bra-r.6   103829685   RNA-binding protein 48 
 ghi-r.1   107916836   RNA-binding protein 48 
 ghi-r.1   107920956   RNA-binding protein 48 
 ghi-r.1   107954032   uncharacterized LOC107954032 
 cit-r.1   102623952   uncharacterized LOC102623952 
 gma-u.5   100527829   RNA-binding protein 48 
 vvi-u.5   100249934   uncharacterized LOC100249934 
 ppo-u.5   7481688   uncharacterized LOC7481688 
 mtr-u.5   11435370   RNA-binding protein 48 
 sly-u.5   101251605   uncharacterized LOC101251605 
 sot-r.1   102581457   RNA-binding protein 48 
 nta-r.1   107825510   uncharacterized LOC107825510 
 nta-r.1   107782542   uncharacterized LOC107782542 
 osa-u.5   4328008   uncharacterized LOC4328008 
 zma-u.5   100280490   nucleic acid binding protein 
 tae-r.2   123131644   RNA-binding protein 48 
 hvu-r.1   123402874   RNA-binding protein 48-like 
 sbi-r.1   8085166   RNA-binding protein 48 
 bdi-r.1   100835948   RNA-binding protein 48 

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Top 50 coexpressed genes to AT2G27790 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G27790 (ath-u.5 coexpression data)

CoexMap"817326"


athAT2G27790 | Entrez gene ID : 817326      
Species ath bra ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre bna
Paralog 9 1 3 1 1 1 1 1 1 1 2 1 1 1 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001189622.1 [sequence] [blastp]
NP_001324572.1 [sequence] [blastp]
NP_001324573.1 [sequence] [blastp]
NP_180347.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001189622.1)
nucl 6,  cyto_nucl 4,  plas 1,  cyto 1  (predict for NP_001324572.1)
nucl 9,  cyto_nucl 5  (predict for NP_001324573.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_180347.2)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_001189622.1)
other 6  (predict for NP_001324572.1)
other 8  (predict for NP_001324573.1)
other 8,  mito 3  (predict for NP_180347.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT2G27790
ath-r.7
for
AT2G27790
ath-m.9
for
AT2G27790
ath-e.2
for
AT2G27790
ath-m.4.bio
for
AT2G27790
ath-m.4.hor
for
AT2G27790
ath-m.4.lig
for
AT2G27790
ath-m.4.str
for
AT2G27790
ath-m.4.tis
for
AT2G27790
bra-r.6
for
103829685
ghi-r.1
for
107916836
ghi-r.1
for
107920956
ghi-r.1
for
107954032
cit-r.1
for
102623952
gma-u.5
for
100527829
vvi-u.5
for
100249934
ppo-u.5
for
7481688
mtr-u.5
for
11435370
sly-u.5
for
101251605
sot-r.1
for
102581457
nta-r.1
for
107825510
nta-r.1
for
107782542
osa-u.5
for
4328008
zma-u.5
for
100280490
tae-r.2
for
123131644
hvu-r.1
for
123402874
sbi-r.1
for
8085166
bdi-r.1
for
100835948


Ortholog ID: 7519
Species ath bra ghi ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae hvu sbi bdi
Symbol AT2G27790 LOC103829685 LOC107916836 LOC107920956 LOC121220147 LOC102623952 LOC100527829 LOC100249934 LOC7481688 LOC11435370 LOC101251605 LOC102581457 LOC107825510 LOC107782542 LOC4328008 LOC100280490 LOC123143023 LOC123402874 LOC8085166 LOC100835948
Function* RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding protein 48 RNA-binding protein 48 RNA-binding protein 48 RNA-binding protein 48 uncharacterized LOC102623952 RNA-binding protein 48 uncharacterized LOC100249934 uncharacterized LOC7481688 RNA-binding protein 48 uncharacterized LOC101251605 RNA-binding protein 48 uncharacterized LOC107825510 uncharacterized LOC107782542 uncharacterized LOC4328008 nucleic acid binding protein RNA-binding protein 48 RNA-binding protein 48-like RNA-binding protein 48 RNA-binding protein 48
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00750 Vitamin B6 metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00750 Vitamin B6 metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00750 Vitamin B6 metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00770 Pantothenate and CoA biosynthesis 4
nta01240 Biosynthesis of cofactors 4
nta02010 ABC transporters 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 5
nta00020 Citrate cycle (TCA cycle) 2
nta00480 Glutathione metabolism 2
nta01200 Carbon metabolism 2
nta01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817326 103829685 107916836 107920956 121220147 102623952 100527829 100249934 7481688 11435370 101251605 102581457 107825510 107782542 4328008 100280490 123143023 123402874 8085166 100835948
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