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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   CRL1   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-r.7   CRL1   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-m.9   CRL1   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-e.2   CRL1   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-m.4.bio   CRL1   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-m.4.hor   CRL1   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-m.4.lig   CRL1   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-m.4.str   CRL1   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-m.4.tis   CRL1   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-u.5   CRL2   NAD(P)-binding Rossmann-fold superfamily protein 
 gma-u.5   100784817   cinnamoyl-CoA reductase 1 
 vvi-u.5   100242793   Rossmann-fold NAD(P)-binding domain-containing protein-like 
 vvi-u.5   100253060   bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like 
 ppo-u.5   18099717   cinnamoyl-CoA reductase 1 
 ppo-u.5   7474550   cinnamoyl-CoA reductase 1 
 ppo-u.5   7474549   cinnamoyl-CoA reductase 1 
 mtr-u.5   11421771   cinnamoyl-CoA reductase 1 
 mtr-u.5   11423739   cinnamoyl-CoA reductase 1 
 sly-u.5   101268681   cinnamoyl-CoA reductase 1 
 osa-u.5   4344824   cinnamoyl-CoA reductase 1 
 osa-u.5   4341559   cinnamoyl-CoA reductase 1 
 zma-u.5   100193896   NAD(P)-binding Rossmann-fold superfamily protein 
 zma-u.5   103638781   cinnamoyl-CoA reductase 2 
 zma-u.5   100282448   uncharacterized LOC100282448 

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Top 50 coexpressed genes to CRL1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CRL1 (ath-u.5 coexpression data)

CoexMap"817925"


athCRL1 | Entrez gene ID : 817925      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 10 1 2 3 2 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071456 [list] [network] cellular response to hypoxia  (241 genes)  HEP  
GO:0009408 [list] [network] response to heat  (271 genes)  IEP  
GO:0009414 [list] [network] response to water deprivation  (426 genes)  IEP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IEP  
GO CC
GO MF
Protein NP_180917.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  pero 1  (predict for NP_180917.1)
Subcellular
localization
TargetP
other 7,  scret 4  (predict for NP_180917.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
CRL1
ath-r.7
for
CRL1
ath-m.9
for
CRL1
ath-e.2
for
CRL1
ath-m.4.bio
for
CRL1
ath-m.4.hor
for
CRL1
ath-m.4.lig
for
CRL1
ath-m.4.str
for
CRL1
ath-m.4.tis
for
CRL1
ath-u.5
for
CRL2
gma-u.5
for
100784817
vvi-u.5
for
100242793
vvi-u.5
for
100253060
ppo-u.5
for
18099717
ppo-u.5
for
7474550
ppo-u.5
for
7474549
mtr-u.5
for
11421771
mtr-u.5
for
11423739
sly-u.5
for
101268681
osa-u.5
for
4344824
osa-u.5
for
4341559
zma-u.5
for
100193896
zma-u.5
for
103638781
zma-u.5
for
100282448


Ortholog ID: 2265
Species ath ath bra bna bna ghi ghi cit cit gma ppo ppo mtr mtr sly sot nta nta osa zma zma tae tae hvu hvu bdi bdi
Symbol CRL1 CRL2 LOC103865283 LOC106367237 LOC106375839 LOC107960613 LOC107904869 LOC102618402 LOC102629953 LOC100784817 LOC18099717 LOC7474549 LOC11421771 LOC11423739 LOC101268681 LOC102577831 LOC107812927 LOC107812936 LOC4341559 LOC103638788 LOC100282448 LOC123169554 LOC123157015 LOC123407666 LOC123410096 LOC100821584 LOC100821900
Function* NAD(P)-binding Rossmann-fold superfamily protein NAD(P)-binding Rossmann-fold superfamily protein cinnamoyl-CoA reductase 1 cinnamoyl-CoA reductase 1-like cinnamoyl-CoA reductase 1-like cinnamoyl-CoA reductase 1 cinnamoyl-CoA reductase 1 cinnamoyl-CoA reductase 1-like cinnamoyl-CoA reductase 1 cinnamoyl-CoA reductase 1 cinnamoyl-CoA reductase 1 cinnamoyl-CoA reductase 1 cinnamoyl-CoA reductase 1 cinnamoyl-CoA reductase 1 cinnamoyl-CoA reductase 1 cinnamoyl-CoA reductase 2 cinnamoyl-CoA reductase 1 cinnamoyl-CoA reductase 1 cinnamoyl-CoA reductase 1 cinnamoyl-CoA reductase 1 uncharacterized LOC100282448 cinnamoyl-CoA reductase 1 cinnamoyl-CoA reductase 1 cinnamoyl-CoA reductase 1-like cinnamoyl-CoA reductase 1-like cinnamoyl-CoA reductase 1 cinnamoyl-CoA reductase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 10
ath00860 Porphyrin metabolism 6
ath01240 Biosynthesis of cofactors 6
ath01210 2-Oxocarboxylic acid metabolism 6
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00480 Glutathione metabolism 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00053 Ascorbate and aldarate metabolism 2
ppo00562 Inositol phosphate metabolism 2
ppo01240 Biosynthesis of cofactors 2
ppo04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 6
sot00010 Glycolysis / Gluconeogenesis 3
sot00030 Pentose phosphate pathway 2
sot00051 Fructose and mannose metabolism 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 3
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
osa01230 Biosynthesis of amino acids 2
osa00350 Tyrosine metabolism 2
osa00360 Phenylalanine metabolism 2
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00380 Tryptophan metabolism 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 6
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 4
tae00220 Arginine biosynthesis 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 6
tae01200 Carbon metabolism 3
tae00380 Tryptophan metabolism 3
tae04075 Plant hormone signal transduction 3
tae00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817925 817926 103865283 106367237 106375839 107960613 107904869 102618402 102629953 100784817 18099717 7474549 11421771 11423739 101268681 102577831 107812927 107812936 4341559 103638788 100282448 123169554 123157015 123407666 123410096 100821584 100821900
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