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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT2G34160   Alba DNA/RNA-binding protein 
 ath-r.7   AT2G34160   Alba DNA/RNA-binding protein 
 ath-m.9   AT2G34160   Alba DNA/RNA-binding protein 
 ath-e.2   AT2G34160   Alba DNA/RNA-binding protein 
 ath-m.4.bio   AT2G34160   Alba DNA/RNA-binding protein 
 ath-m.4.hor   AT2G34160   Alba DNA/RNA-binding protein 
 ath-m.4.lig   AT2G34160   Alba DNA/RNA-binding protein 
 ath-m.4.str   AT2G34160   Alba DNA/RNA-binding protein 
 ath-m.4.tis   AT2G34160   Alba DNA/RNA-binding protein 
 ath-u.5   DAN1   Alba DNA/RNA-binding protein 
 ath-u.5   AT1G29250   Alba DNA/RNA-binding protein 
 bna-r.1   111215997   uncharacterized protein At2g34160 
 ghi-r.1   107901287   uncharacterized protein At2g34160 
 ghi-r.1   107942461   uncharacterized protein At2g34160 
 gma-u.5   100305539   uncharacterized LOC100305539 
 gma-u.5   100305998   uncharacterized LOC100305998 
 gma-u.5   100527358   uncharacterized LOC100527358 
 vvi-u.5   100266288   uncharacterized protein At2g34160 
 ppo-u.5   7471585   uncharacterized protein At2g34160 
 mtr-u.5   11441458   uncharacterized protein At2g34160 
 mtr-u.5   11425894   uncharacterized protein At2g34160 
 mtr-u.5   25484625   uncharacterized protein At2g34160 
 sly-u.5   101264131   uncharacterized protein At2g34160-like 
 sly-u.5   101263420   uncharacterized protein At2g34160 
 sly-u.5   101260443   uncharacterized protein At2g34160 
 sot-r.1   102584300   uncharacterized protein At2g34160-like 
 sot-r.1   102594258   uncharacterized protein At2g34160-like 
 nta-r.1   107831383   uncharacterized protein At2g34160-like 
 nta-r.1   107818027   uncharacterized protein At2g34160-like 
 osa-u.5   4327120   uncharacterized protein At2g34160 
 osa-u.5   4328657   uncharacterized protein At2g34160 
 osa-u.5   4341459   uncharacterized protein At2g34160 
 zma-u.5   103640873   Alba DNA/RNA-binding protein 
 zma-u.5   103649688   Alba DNA/RNA-binding protein 
 zma-u.5   100284257   uncharacterized LOC100284257 
 tae-r.2   123069106   uncharacterized protein At2g34160 
 tae-r.2   123148155   uncharacterized protein At2g34160 
 tae-r.2   123159626   uncharacterized protein At2g34160 
 hvu-r.1   123443051   uncharacterized protein At2g34160-like 
 sbi-r.1   8071658   uncharacterized protein At2g34160 
 sbi-r.1   8056544   uncharacterized protein At2g34160 
 sbi-r.1   8065063   uncharacterized protein At2g34160 
 bdi-r.1   100843564   uncharacterized protein At2g34160 
 bdi-r.1   100834322   uncharacterized protein At2g34160 
 bdi-r.1   100842728   uncharacterized protein At2g34160 
 cre-r.1   CHLRE_09g401600v5   uncharacterized protein 

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Top 50 coexpressed genes to AT2G34160 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G34160 (ath-u.5 coexpression data)

CoexMap"817977"


athAT2G34160 | Entrez gene ID : 817977      
Species ath bna ghi gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre cit bra
Paralog 11 1 2 3 1 1 3 3 2 2 3 3 3 1 3 3 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (183 genes)  IMP  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (897 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_565781.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  chlo 1,  cysk_nucl 1  (predict for NP_565781.1)
Subcellular
localization
TargetP
other 9  (predict for NP_565781.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT2G34160
ath-r.7
for
AT2G34160
ath-m.9
for
AT2G34160
ath-e.2
for
AT2G34160
ath-m.4.bio
for
AT2G34160
ath-m.4.hor
for
AT2G34160
ath-m.4.lig
for
AT2G34160
ath-m.4.str
for
AT2G34160
ath-m.4.tis
for
AT2G34160
ath-u.5
for
DAN1
ath-u.5
for
AT1G29250
bna-r.1
for
111215997
ghi-r.1
for
107901287
ghi-r.1
for
107942461
gma-u.5
for
100305539
gma-u.5
for
100305998
gma-u.5
for
100527358
vvi-u.5
for
100266288
ppo-u.5
for
7471585
mtr-u.5
for
11441458
mtr-u.5
for
11425894
mtr-u.5
for
25484625
sly-u.5
for
101264131
sly-u.5
for
101263420
sly-u.5
for
101260443
sot-r.1
for
102584300
sot-r.1
for
102594258
nta-r.1
for
107831383
nta-r.1
for
107818027
osa-u.5
for
4327120
osa-u.5
for
4328657
osa-u.5
for
4341459
zma-u.5
for
103640873
zma-u.5
for
103649688
zma-u.5
for
100284257
tae-r.2
for
123069106
tae-r.2
for
123148155
tae-r.2
for
123159626
hvu-r.1
for
123443051
sbi-r.1
for
8071658
sbi-r.1
for
8056544
sbi-r.1
for
8065063
bdi-r.1
for
100843564
bdi-r.1
for
100834322
bdi-r.1
for
100842728
cre-r.1
for
CHLRE_09g401600v5


Ortholog ID: 560
Species ath ath ath bra bna bna ghi ghi ghi gma gma gma vvi vvi ppo mtr mtr mtr sly sly sly sot sot nta nta osa osa osa zma zma tae tae hvu hvu sbi bdi bdi bdi cre
Symbol AT2G34160 DAN1 AT1G29250 LOC103850036 LOC106451210 LOC106363928 LOC107907345 LOC107943207 LOC107962627 LOC100305998 LOC100527472 LOC100790121 LOC100266288 LOC100268144 LOC7459023 LOC11441458 LOC11425894 LOC25484625 LOC101264131 LOC101263420 LOC101260443 LOC102594258 LOC102588814 LOC107818027 LOC107783239 LOC4327120 LOC4328657 LOC4341459 LOC103640873 LOC100275297 LOC123159626 LOC123060545 LOC123443051 LOC123410214 LOC8065063 LOC100843564 LOC100834322 LOC100829730 CHLRE_09g401600v5
Function* Alba DNA/RNA-binding protein Alba DNA/RNA-binding protein Alba DNA/RNA-binding protein uncharacterized protein At2g34160-like uncharacterized protein At2g34160 uncharacterized protein At2g34160-like uncharacterized protein At2g34160 uncharacterized protein At2g34160 uncharacterized protein At2g34160 uncharacterized LOC100305998 uncharacterized LOC100527472 uncharacterized protein At2g34160 uncharacterized protein At2g34160 uncharacterized protein At2g34160 uncharacterized protein At2g34160 uncharacterized protein At2g34160 uncharacterized protein At2g34160 uncharacterized protein At2g34160 uncharacterized protein At2g34160-like uncharacterized protein At2g34160 uncharacterized protein At2g34160 uncharacterized protein At2g34160-like uncharacterized protein At2g34160-like uncharacterized protein At2g34160-like uncharacterized protein At2g34160-like uncharacterized protein At2g34160 uncharacterized protein At2g34160 uncharacterized protein At2g34160 Alba DNA/RNA-binding protein uncharacterized LOC100275297 uncharacterized protein At2g34160 uncharacterized protein At2g34160 uncharacterized protein At2g34160-like uncharacterized protein At2g34160-like uncharacterized protein At2g34160 uncharacterized protein At2g34160 uncharacterized protein At2g34160 uncharacterized protein At2g34160 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 4
bna04144 Endocytosis 2
bna04145 Phagosome 2
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma03040 Spliceosome 4
gma03018 RNA degradation 3
gma00190 Oxidative phosphorylation 2
gma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 5
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot04141 Protein processing in endoplasmic reticulum 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 6
nta03020 RNA polymerase 4
nta00190 Oxidative phosphorylation 3
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 10
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00510 N-Glycan biosynthesis 2
cre00513 Various types of N-glycan biosynthesis 2
cre04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817977 819620 839799 103850036 106451210 106363928 107907345 107943207 107962627 100305998 100527472 100790121 100266288 100268144 7459023 11441458 11425894 25484625 101264131 101263420 101260443 102594258 102588814 107818027 107783239 4327120 4328657 4341459 103640873 100275297 123159626 123060545 123443051 123410214 8065063 100843564 100834322 100829730 5720714
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