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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT2G34820   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.bio   AT2G34820   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.hor   AT2G34820   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.lig   AT2G34820   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.str   AT2G34820   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.tis   AT2G34820   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ghi-r.1   107939978   serine/threonine-protein phosphatase 5 
 ghi-r.1   107921740   transcription factor bHLH53 
 nta-r.1   107812557   transcription factor bHLH53 

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Top 50 coexpressed genes to AT2G34820 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G34820 (ath-m.9 coexpression data)

CoexMap"818047"


athAT2G34820 | Entrez gene ID : 818047      
Species ath ghi nta osa sot sly cit bna ppo bdi sbi gma mtr bra tae hvu vvi zma cre
Paralog 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0022619 [list] [network] generative cell differentiation  (3 genes)  IGI  
GO:0055046 [list] [network] microgametogenesis  (63 genes)  IGI  
GO:0009555 [list] [network] pollen development  (385 genes)  IGI  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  ISS TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (446 genes)  IEA  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_181028.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_181028.2)
Subcellular
localization
TargetP
other 7  (predict for NP_181028.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT2G34820
ath-m.4.bio
for
AT2G34820
ath-m.4.hor
for
AT2G34820
ath-m.4.lig
for
AT2G34820
ath-m.4.str
for
AT2G34820
ath-m.4.tis
for
AT2G34820
ghi-r.1
for
107939978
ghi-r.1
for
107921740
nta-r.1
for
107812557


Ortholog ID: 5480
Species ghi ghi nta
Symbol LOC107921740 LOC107917328 LOC107812557
Function* transcription factor bHLH53 transcription factor bHLH53 transcription factor bHLH53
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00620 Pyruvate metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00640 Propanoate metabolism 2
Expression Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107921740 107917328 107812557
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