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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   GRF3   growth-regulating factor 3 
 ath-r.7   GRF3   growth-regulating factor 3 
 ath-m.9   GRF3   growth-regulating factor 3 
 ath-e.2   GRF3   growth-regulating factor 3 
 ath-m.4.bio   GRF3   growth-regulating factor 3 
 ath-m.4.hor   GRF3   growth-regulating factor 3 
 ath-m.4.lig   GRF3   growth-regulating factor 3 
 ath-m.4.str   GRF3   growth-regulating factor 3 
 ath-m.4.tis   GRF3   growth-regulating factor 3 
 ath-u.5   GRF4   growth-regulating factor 4 
 gma-u.5   GRF12   growth-regulating factor 
 gma-u.5   GRF3   growth-regulating factor 3 
 gma-u.5   GRF20   growth-regulating factor 
 vvi-u.5   100249368   growth-regulating factor 3 
 ppo-u.5   18100062   growth-regulating factor 4 
 mtr-u.5   11429911   growth-regulating factor 3 
 sly-u.5   101261864   growth-regulating factor 3 
 sly-u.5   101268132   growth-regulating factor 3-like 

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Top 50 coexpressed genes to GRF3 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GRF3 (ath-u.5 coexpression data)

CoexMap"818213"


athGRF3 | Entrez gene ID : 818213      
Species ath gma vvi ppo mtr sly tae osa hvu zma ghi bdi cit bra cre sbi bna nta sot
Paralog 10 3 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0061062 [list] [network] regulation of nematode larval development  (5 genes)  IMP  
GO:0008285 [list] [network] negative regulation of cell population proliferation  (42 genes)  IMP  
GO:0009624 [list] [network] response to nematode  (90 genes)  IEP  
GO:0009739 [list] [network] response to gibberellin  (125 genes)  IEP  
GO:0006351 [list] [network] DNA-templated transcription  (160 genes)  IEA  
GO:0048366 [list] [network] leaf development  (371 genes)  IGI  
GO:0009409 [list] [network] response to cold  (436 genes)  IEP  
GO:0048364 [list] [network] root development  (600 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM ISS  
GO MF
GO:0005524 [list] [network] ATP binding  (321 genes)  IEA  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_181181.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_181181.1)
Subcellular
localization
TargetP
mito 6,  other 4  (predict for NP_181181.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
GRF3

.
ath-r.7
for
GRF3

.
ath-m.9
for
GRF3

.
ath-e.2
for
GRF3

.
ath-m.4.bio
for
GRF3

.
ath-m.4.hor
for
GRF3

.
ath-m.4.lig
for
GRF3

.
ath-m.4.str
for
GRF3

.
ath-m.4.tis
for
GRF3

.
ath-u.5
for
GRF4

.
gma-u.5
for
GRF12

.
gma-u.5
for
GRF3

.
gma-u.5
for
GRF20

.
vvi-u.5
for
100249368

.
ppo-u.5
for
18100062

.
mtr-u.5
for
11429911

.
sly-u.5
for
101261864

.
sly-u.5
for
101268132

.


Ortholog ID: 4531
Species ath ath gma gma sly sly bra vvi ppo mtr ghi ghi bna sot sot cit nta nta
Symbol GRF3 GRF4 GRF12 GRF3 LOC101261864 LOC101268132 LOC103867286 LOC100249368 LOC18100062 LOC11429911 LOC107948122 LOC107908708 LOC106367805 LOC107059479 LOC102596708 LOC102615240 LOC107799814 LOC107813130
Function* growth-regulating factor 3 growth-regulating factor 4 growth-regulating factor growth-regulating factor 3 growth-regulating factor 3 growth-regulating factor 3-like growth-regulating factor 3 growth-regulating factor 3 growth-regulating factor 4 growth-regulating factor 3 growth-regulating factor 3-like growth-regulating factor 3 growth-regulating factor 4 growth-regulating factor 3-like growth-regulating factor 3-like growth-regulating factor 3 growth-regulating factor 3-like growth-regulating factor 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 12
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818213 824457 100817197 100816436 101261864 101268132 103867286 100249368 18100062 11429911 107948122 107908708 106367805 107059479 102596708 102615240 107799814 107813130
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