ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	IRX9	Nucleotide-diphospho-sugar transferases superfamily protein
ath-r.7	IRX9	Nucleotide-diphospho-sugar transferases superfamily protein
ath-m.9	IRX9	Nucleotide-diphospho-sugar transferases superfamily protein
ath-e.2	IRX9	Nucleotide-diphospho-sugar transferases superfamily protein
ath-m.4.bio	IRX9	Nucleotide-diphospho-sugar transferases superfamily protein
ath-m.4.hor	IRX9	Nucleotide-diphospho-sugar transferases superfamily protein
ath-m.4.lig	IRX9	Nucleotide-diphospho-sugar transferases superfamily protein
ath-m.4.str	IRX9	Nucleotide-diphospho-sugar transferases superfamily protein
ath-m.4.tis	IRX9	Nucleotide-diphospho-sugar transferases superfamily protein
bra-r.6	103867226	probable beta-1,4-xylosyltransferase IRX9
bna-r.1	106398725	beta-1,4-xylosyltransferase IRX9
bna-r.1	106385559	beta-1,4-xylosyltransferase IRX9
ghi-r.1	107889620	beta-1,4-xylosyltransferase IRX9
ghi-r.1	107891109	probable beta-1,4-xylosyltransferase IRX9
cit-r.1	102618815	beta-1,4-xylosyltransferase IRX9
gma-u.5	100785607	beta-1,4-xylosyltransferase IRX9
gma-u.5	100782450	beta-1,4-xylosyltransferase IRX9
vvi-u.5	100249957	beta-1,4-xylosyltransferase IRX9
ppo-u.5	18100226	beta-1,4-xylosyltransferase IRX9
ppo-u.5	7467609	beta-1,4-xylosyltransferase IRX9
mtr-u.5	112416240	beta-1,4-xylosyltransferase IRX9
sly-u.5	101254230	beta-1,4-xylosyltransferase IRX9
sot-r.1	102586011	probable beta-1,4-xylosyltransferase IRX9
nta-r.1	107764680	beta-1,4-xylosyltransferase IRX9
nta-r.1	107762480	beta-1,4-xylosyltransferase IRX9
osa-u.5	4332485	probable glucuronosyltransferase Os03g0287800
osa-u.5	4337665	probable glucuronosyltransferase Os05g0123100
zma-u.5	113687178	uncharacterized LOC113687178
zma-u.5	100281273	beta3-glucuronyltransferase
zma-u.5	100272909	beta3-glucuronyltransferase
tae-r.2	123092492	probable glucuronosyltransferase Os03g0287800
tae-r.2	123107778	probable beta-1,4-xylosyltransferase GT43A
tae-r.2	123180205	probable beta-1,4-xylosyltransferase GT43A
hvu-r.1	123406394	probable beta-1,4-xylosyltransferase GT43A
hvu-r.1	123448939	probable glucuronosyltransferase Os03g0287800
sbi-r.1	8071252	probable glucuronosyltransferase Os05g0123100
sbi-r.1	8084039	probable glucuronosyltransferase Os03g0287800
bdi-r.1	100831545	probable glucuronosyltransferase Os05g0123100
bdi-r.1	100835571	probable glucuronosyltransferase Os03g0287800

Annotation

functional annotation

KEGG

GO BP

GO:0010413 [list] [network] glucuronoxylan metabolic process	(12 genes)	IMP
GO:0010417 [list] [network] glucuronoxylan biosynthetic process	(12 genes)	IGI
GO:0045492 [list] [network] xylan biosynthetic process	(31 genes)	IMP
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis	(47 genes)	IMP

GO CC

GO:0005794 [list] [network] Golgi apparatus

(1198 genes)

IDA ISM

GO MF

GO:0042285 [list] [network] xylosyltransferase activity	(15 genes)	IMP
GO:0016757 [list] [network] glycosyltransferase activity	(554 genes)	ISS

Protein

NP_181246.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 2, plas 2, cyto_plas 2, chlo 1, mito 1, E.R. 1, cyto_nucl 1, chlo_mito 1, nucl_plas 1

(predict for NP_181246.1)

Subcellular
localization
TargetP

scret 4

(predict for NP_181246.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for IRX9	ath-r.7 for IRX9	ath-m.9 for IRX9	ath-e.2 for IRX9	ath-m.4.bio for IRX9	ath-m.4.hor for IRX9	ath-m.4.lig for IRX9	ath-m.4.str for IRX9	ath-m.4.tis for IRX9	bra-r.6 for 103867226	bna-r.1 for 106398725	bna-r.1 for 106385559	ghi-r.1 for 107889620	ghi-r.1 for 107891109	cit-r.1 for 102618815	gma-u.5 for 100785607	gma-u.5 for 100782450	vvi-u.5 for 100249957	ppo-u.5 for 18100226	ppo-u.5 for 7467609	mtr-u.5 for 112416240	sly-u.5 for 101254230	sot-r.1 for 102586011	nta-r.1 for 107764680	nta-r.1 for 107762480	osa-u.5 for 4332485	osa-u.5 for 4337665	zma-u.5 for 113687178	zma-u.5 for 100281273	zma-u.5 for 100272909	tae-r.2 for 123092492	tae-r.2 for 123107778	tae-r.2 for 123180205	hvu-r.1 for 123406394	hvu-r.1 for 123448939	sbi-r.1 for 8071252	sbi-r.1 for 8084039	bdi-r.1 for 100831545	bdi-r.1 for 100835571

Ortholog

Ortholog ID: 5704

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

IRX9

Function^*

Nucleotide-diphospho-sugar transferases superfamily protein

probable beta-1,4-xylosyltransferase IRX9

beta-1,4-xylosyltransferase IRX9

probable beta-1,4-xylosyltransferase IRX9

beta-1,4-xylosyltransferase IRX9

probable beta-1,4-xylosyltransferase IRX9

beta-1,4-xylosyltransferase IRX9