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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   ABI4   Integrase-type DNA-binding superfamily protein 
 ath-m.4.bio   ABI4   Integrase-type DNA-binding superfamily protein 
 ath-m.4.hor   ABI4   Integrase-type DNA-binding superfamily protein 
 ath-m.4.lig   ABI4   Integrase-type DNA-binding superfamily protein 
 ath-m.4.str   ABI4   Integrase-type DNA-binding superfamily protein 
 ath-m.4.tis   ABI4   Integrase-type DNA-binding superfamily protein 
 bra-r.6   103866970   ethylene-responsive transcription factor ABI4-like 
 bra-r.6   103857918   ethylene-responsive transcription factor ABI4 
 gma-u.5   100779779   ethylene-responsive transcription factor ABI4 
 gma-u.5   SGR   AP2-domain transcription factor SGR 
 zma-u.5   100384333   ethylene-responsive transcription factor ABI4 

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Top 50 coexpressed genes to ABI4 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ABI4 (ath-m.9 coexpression data)

CoexMap"818614"


athABI4 | Entrez gene ID : 818614      
Species ath bra gma zma sbi ghi cre ppo mtr tae sly osa cit sot bdi nta hvu vvi bna
Paralog 6 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009747 [list] [network] hexokinase-dependent signaling  (2 genes)  NAS  
GO:0010896 [list] [network] regulation of triglyceride catabolic process  (2 genes)  IMP  
GO:0010353 [list] [network] response to trehalose  (3 genes)  IMP  
GO:2000082 [list] [network] regulation of L-ascorbic acid biosynthetic process  (7 genes)  IDA  
GO:0031930 [list] [network] mitochondria-nucleus signaling pathway  (12 genes)  IDA IMP  
GO:0010449 [list] [network] root meristem growth  (16 genes)  IMP  
GO:0005983 [list] [network] starch catabolic process  (17 genes)  NAS  
GO:0032880 [list] [network] regulation of protein localization  (29 genes)  IDA  
GO:0010182 [list] [network] sugar mediated signaling pathway  (40 genes)  TAS  
GO:0009749 [list] [network] response to glucose  (71 genes)  IMP  
GO:0009744 [list] [network] response to sucrose  (79 genes)  IEP  
GO:0009738 [list] [network] abscisic acid-activated signaling pathway  (111 genes)  IMP  
GO:0010119 [list] [network] regulation of stomatal movement  (113 genes)  IGI  
GO:0048527 [list] [network] lateral root development  (131 genes)  IMP  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (262 genes)  IDA  
GO:0009414 [list] [network] response to water deprivation  (426 genes)  IMP  
GO:0006970 [list] [network] response to osmotic stress  (578 genes)  IMP  
GO:0048316 [list] [network] seed development  (775 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEA TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IDA  
GO:0043565 [list] [network] sequence-specific DNA binding  (875 genes)  IPI  
GO:0003677 [list] [network] DNA binding  (1274 genes)  IDA IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  IEA ISS TAS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_181551.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_181551.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for NP_181551.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
ABI4
ath-m.4.bio
for
ABI4
ath-m.4.hor
for
ABI4
ath-m.4.lig
for
ABI4
ath-m.4.str
for
ABI4
ath-m.4.tis
for
ABI4
bra-r.6
for
103866970
bra-r.6
for
103857918
gma-u.5
for
100779779
gma-u.5
for
SGR
zma-u.5
for
100384333


Ortholog ID: 7542
Species bra bra gma gma zma
Symbol LOC103866970 LOC103857918 LOC100779779 SGR LOC100384333
Function* ethylene-responsive transcription factor ABI4-like ethylene-responsive transcription factor ABI4 ethylene-responsive transcription factor ABI4 AP2-domain transcription factor SGR ethylene-responsive transcription factor ABI4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103866970 103857918 100779779 100301892 100384333
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