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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT2G42040   WRC protein 
 ath-r.7   AT2G42040   WRC protein 
 ath-m.9   AT2G42040   WRC protein 
 ath-e.2   AT2G42040   WRC protein 
 ath-m.4.bio   AT2G42040   WRC protein 
 ath-m.4.hor   AT2G42040   WRC protein 
 ath-m.4.lig   AT2G42040   WRC protein 
 ath-m.4.str   AT2G42040   WRC protein 
 ath-m.4.tis   AT2G42040   WRC protein 
 gma-u.5   100810559   uncharacterized LOC100810559 
 gma-u.5   102665471   putative uncharacterized protein DDB_G0274405 
 gma-u.5   102659370   uncharacterized LOC102659370 
 vvi-u.5   104880119   uncharacterized LOC104880119 
 vvi-u.5   100260560   GRF-interacting factor 10 
 ppo-u.5   7490604   uncharacterized LOC7490604 
 ppo-u.5   7479522   uncharacterized LOC7479522 
 ppo-u.5   7468990   uncharacterized LOC7468990 
 mtr-u.5   11437939   uncharacterized LOC11437939 
 mtr-u.5   25483531   uncharacterized LOC25483531 
 sly-u.5   101263858   uncharacterized LOC101263858 
 osa-u.5   4330884   uncharacterized LOC4330884 
 zma-u.5   100272374   uncharacterized LOC100272374 
 zma-u.5   100277530   uncharacterized LOC100277530 
 zma-u.5   100275489   uncharacterized LOC100275489 

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Top 50 coexpressed genes to AT2G42040 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G42040 (ath-u.5 coexpression data)

CoexMap"818804"


athAT2G42040 | Entrez gene ID : 818804      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 9 3 2 3 2 1 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
Protein NP_565964.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_565964.1)
Subcellular
localization
TargetP
mito 7  (predict for NP_565964.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT2G42040

.
ath-r.7
for
AT2G42040

.
ath-m.9
for
AT2G42040

.
ath-e.2
for
AT2G42040

.
ath-m.4.bio
for
AT2G42040

.
ath-m.4.hor
for
AT2G42040

.
ath-m.4.lig
for
AT2G42040

.
ath-m.4.str
for
AT2G42040

.
ath-m.4.tis
for
AT2G42040

.
gma-u.5
for
100810559

.
gma-u.5
for
102665471

.
gma-u.5
for
102659370

.
vvi-u.5
for
104880119

.
vvi-u.5
for
100260560

.
ppo-u.5
for
7490604

.
ppo-u.5
for
7479522

.
ppo-u.5
for
7468990

.
mtr-u.5
for
11437939

.
mtr-u.5
for
25483531

.
sly-u.5
for
101263858

.
osa-u.5
for
4330884

.
zma-u.5
for
100272374

.
zma-u.5
for
100277530

.
zma-u.5
for
100275489

.


Ortholog ID: 4365
Species ath gma gma sly osa zma zma bra bra vvi vvi ppo ppo mtr mtr hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT2G42040 LOC102659370 LOC100810559 LOC101263858 LOC4330884 LOC100277530 LOC100275489 LOC103865922 LOC103858008 LOC100260560 LOC104880119 LOC7490604 LOC7468990 LOC25483531 LOC11437939 LOC123409355 LOC107945745 LOC107901972 LOC106428174 LOC111215126 LOC8077334 LOC102598067 LOC102623038 LOC104581615 LOC107809074 LOC107764594
Function* WRC protein uncharacterized LOC102659370 uncharacterized LOC100810559 uncharacterized LOC101263858 uncharacterized LOC4330884 uncharacterized LOC100277530 uncharacterized LOC100275489 uncharacterized LOC103865922 uncharacterized LOC103858008 GRF-interacting factor 10 uncharacterized LOC104880119 uncharacterized LOC7490604 uncharacterized LOC7468990 uncharacterized LOC25483531 uncharacterized LOC11437939 alanine and glycine-rich protein-like uncharacterized LOC107945745 uncharacterized LOC107901972 uncharacterized LOC106428174 uncharacterized LOC111215126 uncharacterized LOC8077334 uncharacterized LOC102598067 uncharacterized LOC102623038 uncharacterized LOC104581615 uncharacterized LOC107809074 uncharacterized LOC107764594
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00051 Fructose and mannose metabolism 2
ppo00052 Galactose metabolism 2
ppo00500 Starch and sucrose metabolism 2
ppo00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 3
mtr00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 2
nta03040 Spliceosome 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 3
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818804 102659370 100810559 101263858 4330884 100277530 100275489 103865922 103858008 100260560 104880119 7490604 7468990 25483531 11437939 123409355 107945745 107901972 106428174 111215126 8077334 102598067 102623038 104581615 107809074 107764594
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