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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   ALG3   asparagine-linked glycosylation 3 
 ath-r.7   ALG3   asparagine-linked glycosylation 3 
 ath-m.9   ALG3   asparagine-linked glycosylation 3 
 ath-e.2   ALG3   asparagine-linked glycosylation 3 
 ath-m.4.bio   ALG3   asparagine-linked glycosylation 3 
 ath-m.4.hor   ALG3   asparagine-linked glycosylation 3 
 ath-m.4.lig   ALG3   asparagine-linked glycosylation 3 
 ath-m.4.str   ALG3   asparagine-linked glycosylation 3 
 ath-m.4.tis   ALG3   asparagine-linked glycosylation 3 
 bra-r.6   103866347   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 
 bna-r.1   106390417   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 
 bna-r.1   106450414   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase-like 
 ghi-r.1   107940990   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 
 ghi-r.1   107929848   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 
 cit-r.1   102617688   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 
 gma-u.5   100793743   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 
 gma-u.5   100785253   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 
 vvi-u.5   100253790   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 
 ppo-u.5   7457948   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 
 mtr-u.5   11434786   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 
 sly-u.5   101251511   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 
 sot-r.1   102598887   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 
 nta-r.1   107792795   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 
 nta-r.1   107810286   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase-like 
 osa-u.5   9266078   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 
 zma-u.5   100276684   Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-13-mannosyltransferase 
 tae-r.2   123060251   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 
 hvu-r.1   123441433   uncharacterized LOC123441433 
 sbi-r.1   8056549   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 
 bdi-r.1   100822122   dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 

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Top 50 coexpressed genes to ALG3 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ALG3 (ath-u.5 coexpression data)

CoexMap"819388"


athALG3 | Entrez gene ID : 819388      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 1 1 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00510 [list] [network] N-Glycan biosynthesis (49 genes)
ath00513 [list] [network] Various types of N-glycan biosynthesis (35 genes)
GO BP
GO:0006487 [list] [network] protein N-linked glycosylation  (40 genes)  IMP  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (897 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0000033 [list] [network] alpha-1,3-mannosyltransferase activity  (1 genes)  IDA  
GO:0052917 [list] [network] dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity  (2 genes)  IGI  
Protein NP_001031556.1 [sequence] [blastp]
NP_001031557.1 [sequence] [blastp]
NP_001318442.1 [sequence] [blastp]
NP_001324356.1 [sequence] [blastp]
NP_182297.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  cyto_plas 3,  E.R. 3,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001031556.1)
plas 4,  mito 3,  cyto_plas 2,  E.R. 2  (predict for NP_001031557.1)
plas 5,  cyto_plas 3,  E.R. 3,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001318442.1)
plas 5,  cyto_plas 3,  E.R. 3,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001324356.1)
plas 4,  E.R. 3,  cyto_plas 3,  chlo 1,  mito 1,  vacu 1,  chlo_mito 1  (predict for NP_182297.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for NP_001031556.1)
mito 5,  other 4  (predict for NP_001031557.1)
mito 5,  other 4  (predict for NP_001318442.1)
mito 5,  other 4  (predict for NP_001324356.1)
mito 5,  other 4  (predict for NP_182297.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
ALG3
ath-r.7
for
ALG3
ath-m.9
for
ALG3
ath-e.2
for
ALG3
ath-m.4.bio
for
ALG3
ath-m.4.hor
for
ALG3
ath-m.4.lig
for
ALG3
ath-m.4.str
for
ALG3
ath-m.4.tis
for
ALG3
bra-r.6
for
103866347
bna-r.1
for
106390417
bna-r.1
for
106450414
ghi-r.1
for
107940990
ghi-r.1
for
107929848
cit-r.1
for
102617688
gma-u.5
for
100793743
gma-u.5
for
100785253
vvi-u.5
for
100253790
ppo-u.5
for
7457948
mtr-u.5
for
11434786
sly-u.5
for
101251511
sot-r.1
for
102598887
nta-r.1
for
107792795
nta-r.1
for
107810286
osa-u.5
for
9266078
zma-u.5
for
100276684
tae-r.2
for
123060251
hvu-r.1
for
123441433
sbi-r.1
for
8056549
bdi-r.1
for
100822122


Ortholog ID: 11671
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae hvu sbi bdi
Symbol ALG3 LOC103866347 LOC106390417 LOC106450414 LOC107940990 LOC107929848 LOC102617688 LOC100793743 LOC100785253 LOC100253790 LOC7457948 LOC11434786 LOC101251511 LOC102598887 LOC107792795 LOC107810286 LOC9266078 LOC100276684 LOC123060251 LOC123441433 LOC8056549 LOC100822122
Function* asparagine-linked glycosylation 3 dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase-like dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase-like dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-13-mannosyltransferase dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase uncharacterized LOC123441433 dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00510 N-Glycan biosynthesis 4
ath00513 Various types of N-glycan biosynthesis 3
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 6
bra00190 Oxidative phosphorylation 5
bra04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00510 N-Glycan biosynthesis 9
bna00513 Various types of N-glycan biosynthesis 7
bna04141 Protein processing in endoplasmic reticulum 5
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00510 N-Glycan biosynthesis 9
bna00513 Various types of N-glycan biosynthesis 7
bna04141 Protein processing in endoplasmic reticulum 5
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00510 N-Glycan biosynthesis 2
vvi04016 MAPK signaling pathway - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 5
mtr04145 Phagosome 4
mtr00510 N-Glycan biosynthesis 3
mtr00513 Various types of N-glycan biosynthesis 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00510 N-Glycan biosynthesis 3
sly00513 Various types of N-glycan biosynthesis 3
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00510 N-Glycan biosynthesis 3
sot00513 Various types of N-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00510 N-Glycan biosynthesis 7
zma00513 Various types of N-glycan biosynthesis 6
zma04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00510 N-Glycan biosynthesis 4
tae03060 Protein export 3
tae00513 Various types of N-glycan biosynthesis 2
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
sbi00510 N-Glycan biosynthesis 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00510 N-Glycan biosynthesis 3
bdi00513 Various types of N-glycan biosynthesis 2
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819388 103866347 106390417 106450414 107940990 107929848 102617688 100793743 100785253 100253790 7457948 11434786 101251511 102598887 107792795 107810286 9266078 100276684 123060251 123441433 8056549 100822122
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