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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   RVE8   Homeodomain-like superfamily protein 
 ath-r.7   RVE8   Homeodomain-like superfamily protein 
 ath-m.9   RVE8   Homeodomain-like superfamily protein 
 ath-e.2   RVE8   Homeodomain-like superfamily protein 
 ath-m.4.bio   RVE8   Homeodomain-like superfamily protein 
 ath-m.4.hor   RVE8   Homeodomain-like superfamily protein 
 ath-m.4.lig   RVE8   Homeodomain-like superfamily protein 
 ath-m.4.str   RVE8   Homeodomain-like superfamily protein 
 ath-m.4.tis   RVE8   Homeodomain-like superfamily protein 
 gma-u.5   MYB118   MYB transcription factor MYB118 
 gma-u.5   100807156   protein REVEILLE 8 
 gma-u.5   100797466   protein REVEILLE 8 
 vvi-u.5   100249962   protein REVEILLE 8 
 ppo-u.5   18100248   protein REVEILLE 8 
 ppo-u.5   7467599   protein REVEILLE 8 
 mtr-u.5   25484055   protein REVEILLE 8 
 sly-u.5   101253545   protein REVEILLE 8 

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Top 50 coexpressed genes to RVE8 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RVE8 (ath-u.5 coexpression data)

CoexMap"820117"


athRVE8 | Entrez gene ID : 820117      
Species ath gma vvi ppo mtr sly bdi hvu bra cit bna sbi ghi osa sot nta cre tae zma
Paralog 9 3 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032922 [list] [network] circadian regulation of gene expression  (9 genes)  IMP  
GO:0042753 [list] [network] positive regulation of circadian rhythm  (12 genes)  IMP  
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (17 genes)  IMP  
GO:0042752 [list] [network] regulation of circadian rhythm  (59 genes)  IGI  
GO:0010628 [list] [network] positive regulation of gene expression  (71 genes)  IMP  
GO:0048573 [list] [network] photoperiodism, flowering  (77 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (875 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_001030662.1 [sequence] [blastp]
NP_001327345.1 [sequence] [blastp]
NP_001327346.1 [sequence] [blastp]
NP_001327347.1 [sequence] [blastp]
NP_001327348.1 [sequence] [blastp]
NP_001327349.1 [sequence] [blastp]
NP_001327350.1 [sequence] [blastp]
NP_001327351.1 [sequence] [blastp]
NP_187571.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_001030662.1)
nucl 8,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001327345.1)
nucl 9,  chlo 1,  plas 1  (predict for NP_001327346.1)
nucl 9,  chlo 1,  plas 1  (predict for NP_001327347.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001327348.1)
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_001327349.1)
nucl 8,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001327350.1)
nucl 8,  cyto 1,  plas 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for NP_001327351.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_187571.2)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for NP_001030662.1)
other 7  (predict for NP_001327345.1)
other 7  (predict for NP_001327346.1)
other 7  (predict for NP_001327347.1)
chlo 7,  other 3  (predict for NP_001327348.1)
chlo 7,  other 3  (predict for NP_001327349.1)
other 7  (predict for NP_001327350.1)
chlo 7,  other 3  (predict for NP_001327351.1)
chlo 7,  other 3  (predict for NP_187571.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
RVE8
ath-r.7
for
RVE8
ath-m.9
for
RVE8
ath-e.2
for
RVE8
ath-m.4.bio
for
RVE8
ath-m.4.hor
for
RVE8
ath-m.4.lig
for
RVE8
ath-m.4.str
for
RVE8
ath-m.4.tis
for
RVE8
gma-u.5
for
MYB118
gma-u.5
for
100807156
gma-u.5
for
100797466
vvi-u.5
for
100249962
ppo-u.5
for
18100248
ppo-u.5
for
7467599
mtr-u.5
for
25484055
sly-u.5
for
101253545


Ortholog ID: 11952
Species ath bra bna bna ghi cit gma gma vvi ppo ppo mtr sly sot nta nta
Symbol RVE8 LOC103870531 LOC106452754 LOC111215777 LOC107891008 LOC102618627 LOC100797466 MYB118 LOC100249962 LOC18100248 LOC7467599 LOC25484055 LOC101253545 LOC102604654 LOC107779686 LOC107773606
Function* Homeodomain-like superfamily protein protein REVEILLE 8 protein REVEILLE 8 protein REVEILLE 8-like protein REVEILLE 8 protein REVEILLE 8 protein REVEILLE 8 MYB transcription factor MYB118 protein REVEILLE 8 protein REVEILLE 8 protein REVEILLE 8 protein REVEILLE 8 protein REVEILLE 8 protein REVEILLE 8-like protein REVEILLE 8 protein REVEILLE 8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna00906 Carotenoid biosynthesis 2
bna04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00740 Riboflavin metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820117 103870531 106452754 111215777 107891008 102618627 100797466 778050 100249962 18100248 7467599 25484055 101253545 102604654 107779686 107773606
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