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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G11130   Clathrin, heavy chain 
 ath-r.7   AT3G11130   Clathrin, heavy chain 
 ath-e.2   AT3G11130   Clathrin, heavy chain 
 ath-u.5   AT3G08530   Clathrin, heavy chain 
 gma-u.5   547986   clathrin heavy chain 
 gma-u.5   100786617   clathrin heavy chain 2 
 gma-u.5   100784651   clathrin heavy chain 2 
 vvi-u.5   100256972   clathrin heavy chain 1-like 
 vvi-u.5   100251869   clathrin heavy chain 2 
 ppo-u.5   7487811   clathrin heavy chain 1 
 ppo-u.5   7494511   clathrin heavy chain 1 
 ppo-u.5   7474422   clathrin heavy chain 1 
 mtr-u.5   11411271   clathrin heavy chain 1 
 mtr-u.5   11408658   clathrin heavy chain 1 
 mtr-u.5   11420719   clathrin heavy chain 2 
 sly-u.5   101250125   clathrin heavy chain 1 
 sly-u.5   101259922   clathrin heavy chain 1 
 sly-u.5   101259158   clathrin heavy chain 1 
 osa-u.5   4349546   clathrin heavy chain 1-like 
 osa-u.5   4351255   clathrin heavy chain 2-like 
 zma-u.5   103652644   clathrin heavy chain 1 
 zma-u.5   100193501   uncharacterized LOC100193501 
 zma-u.5   103640647   clathrin heavy chain 1 

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Top 50 coexpressed genes to AT3G11130 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G11130 (ath-u.5 coexpression data)

CoexMap"820284"


athAT3G11130 | Entrez gene ID : 820284    
Species ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 2 3 3 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04142 [list] [network] Lysosome (82 genes)
ath04144 [list] [network] Endocytosis (156 genes)
ath05100 [list] [network] Bacterial invasion of epithelial cells (26 genes)
GO BP
GO:0072583 [list] [network] clathrin-dependent endocytosis  (13 genes)  IMP  
GO:0006897 [list] [network] endocytosis  (31 genes)  IMP  
GO:0010118 [list] [network] stomatal movement  (63 genes)  IMP  
GO:0016192 [list] [network] vesicle-mediated transport  (246 genes)  IDA IMP  
GO:0009414 [list] [network] response to water deprivation  (426 genes)  IMP  
GO CC
GO:0000325 [list] [network] plant-type vacuole  (788 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005773 [list] [network] vacuole  (984 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA RCA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO MF
GO:0032051 [list] [network] clathrin light chain binding  (2 genes)  IEA  
GO:0005198 [list] [network] structural molecule activity  (175 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_187724.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 4  (predict for NP_187724.2)
Subcellular
localization
TargetP
scret 6,  other 3  (predict for NP_187724.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G11130

.
ath-r.7
for
AT3G11130

.
ath-e.2
for
AT3G11130

.
ath-u.5
for
AT3G08530

.
gma-u.5
for
547986

.
gma-u.5
for
100786617

.
gma-u.5
for
100784651

.
vvi-u.5
for
100256972

.
vvi-u.5
for
100251869

.
ppo-u.5
for
7487811

.
ppo-u.5
for
7494511

.
ppo-u.5
for
7474422

.
mtr-u.5
for
11411271

.
mtr-u.5
for
11408658

.
mtr-u.5
for
11420719

.
sly-u.5
for
101250125

.
sly-u.5
for
101259922

.
sly-u.5
for
101259158

.
osa-u.5
for
4349546

.
osa-u.5
for
4351255

.
zma-u.5
for
103652644

.
zma-u.5
for
100193501

.
zma-u.5
for
103640647

.


Ortholog ID: 1621
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol AT3G08530 AT3G11130 LOC100784651 LOC100786715 LOC101250125 LOC101259922 LOC4351255 LOC4349546 LOC103652644 LOC103640647 LOC103870773 LOC103859264 LOC100256972 LOC100251869 LOC7487811 LOC7494511 LOC11408658 LOC11420719 LOC123086338 LOC123096679 LOC123448143 LOC123452830 LOC121218572 LOC107957301 LOC106352384 LOC106439169 CHLRE_02g101400v5 LOC8055484 LOC8067576 LOC102594928 LOC102581452 LOC102624350 LOC100837941 LOC100841671 LOC107791617 LOC107815448
Function* Clathrin, heavy chain Clathrin, heavy chain clathrin heavy chain 2 clathrin heavy chain 2 clathrin heavy chain 1 clathrin heavy chain 1 clathrin heavy chain 2-like clathrin heavy chain 1-like clathrin heavy chain 1 clathrin heavy chain 1 clathrin heavy chain 2 clathrin heavy chain 2 clathrin heavy chain 1-like clathrin heavy chain 2 clathrin heavy chain 1 clathrin heavy chain 1 clathrin heavy chain 1 clathrin heavy chain 2 clathrin heavy chain 1 clathrin heavy chain 1 clathrin heavy chain 1 clathrin heavy chain 1-like clathrin heavy chain 1 clathrin heavy chain 1 clathrin heavy chain 1 clathrin heavy chain 2 uncharacterized protein clathrin heavy chain 1 clathrin heavy chain 1 clathrin heavy chain 1 clathrin heavy chain 1-like clathrin heavy chain 1 clathrin heavy chain 1 clathrin heavy chain 1 clathrin heavy chain 1 clathrin heavy chain 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 4
ath04144 Endocytosis 3
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 5
ath04142 Lysosome 3
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 7
gma04142 Lysosome 6
gma05100 Bacterial invasion of epithelial cells 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 7
gma05100 Bacterial invasion of epithelial cells 6
gma04142 Lysosome 4
gma03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 4
sly04142 Lysosome 3
sly05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 4
sly04144 Endocytosis 4
sly05100 Bacterial invasion of epithelial cells 3
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 4
osa04144 Endocytosis 4
osa05100 Bacterial invasion of epithelial cells 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 6
osa04142 Lysosome 3
osa05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 5
zma04144 Endocytosis 4
zma05100 Bacterial invasion of epithelial cells 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 6
zma04144 Endocytosis 5
zma05100 Bacterial invasion of epithelial cells 4
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
vvi04144 Endocytosis 2
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04142 Lysosome 2
vvi05100 Bacterial invasion of epithelial cells 2
vvi00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 3
ppo04144 Endocytosis 3
ppo04141 Protein processing in endoplasmic reticulum 3
ppo05100 Bacterial invasion of epithelial cells 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 4
ppo04144 Endocytosis 4
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 2
mtr04144 Endocytosis 2
mtr05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 4
mtr04142 Lysosome 3
mtr05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 8
tae04144 Endocytosis 6
tae05100 Bacterial invasion of epithelial cells 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 6
tae04144 Endocytosis 6
tae05100 Bacterial invasion of epithelial cells 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 4
hvu05100 Bacterial invasion of epithelial cells 3
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04142 Lysosome 3
hvu04144 Endocytosis 3
hvu04141 Protein processing in endoplasmic reticulum 3
hvu05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 9
ghi04142 Lysosome 8
ghi05100 Bacterial invasion of epithelial cells 8
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 8
ghi04144 Endocytosis 8
ghi05100 Bacterial invasion of epithelial cells 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 6
bna04144 Endocytosis 6
bna05100 Bacterial invasion of epithelial cells 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 8
bna04144 Endocytosis 8
bna05100 Bacterial invasion of epithelial cells 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 6
cre04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04142 Lysosome 2
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi04142 Lysosome 2
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 5
sot04142 Lysosome 3
sot05100 Bacterial invasion of epithelial cells 3
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 5
sot04144 Endocytosis 5
sot05100 Bacterial invasion of epithelial cells 3
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit04144 Endocytosis 3
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 5
bdi04142 Lysosome 3
bdi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 5
bdi04142 Lysosome 2
bdi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 8
nta04144 Endocytosis 6
nta05100 Bacterial invasion of epithelial cells 6
nta00190 Oxidative phosphorylation 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 10
nta05100 Bacterial invasion of epithelial cells 8
nta04142 Lysosome 6
nta04141 Protein processing in endoplasmic reticulum 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820001 820284 100784651 100786715 101250125 101259922 4351255 4349546 103652644 103640647 103870773 103859264 100256972 100251869 7487811 7494511 11408658 11420719 123086338 123096679 123448143 123452830 121218572 107957301 106352384 106439169 5725357 8055484 8067576 102594928 102581452 102624350 100837941 100841671 107791617 107815448
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