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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   UBP25   ubiquitin-specific protease 25 
 ath-r.7   UBP25   ubiquitin-specific protease 25 
 ath-m.9   UBP25   ubiquitin-specific protease 25 
 ath-e.2   UBP25   ubiquitin-specific protease 25 
 ath-m.4.bio   UBP25   ubiquitin-specific protease 25 
 ath-m.4.hor   UBP25   ubiquitin-specific protease 25 
 ath-m.4.lig   UBP25   ubiquitin-specific protease 25 
 ath-m.4.str   UBP25   ubiquitin-specific protease 25 
 ath-m.4.tis   UBP25   ubiquitin-specific protease 25 
 gma-u.5   100775539   ubiquitin carboxyl-terminal hydrolase 25 
 gma-u.5   100820436   ubiquitin carboxyl-terminal hydrolase 25 
 vvi-u.5   100253154   ubiquitin carboxyl-terminal hydrolase 25 
 ppo-u.5   18095524   ubiquitin carboxyl-terminal hydrolase 25 
 ppo-u.5   7472360   ubiquitin carboxyl-terminal hydrolase 25 
 mtr-u.5   25487057   ubiquitin carboxyl-terminal hydrolase 25 
 sly-u.5   101243726   ubiquitin carboxyl-terminal hydrolase 25 
 osa-u.5   4339279   ubiquitin carboxyl-terminal hydrolase 25 
 zma-u.5   103645919   uncharacterized LOC103645919 
 zma-u.5   103635830   ubiquitin carboxyl-terminal hydrolase 25 
 zma-u.5   100281515   UBP25 

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Top 50 coexpressed genes to UBP25 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to UBP25 (ath-u.5 coexpression data)

CoexMap"820662"


athUBP25 | Entrez gene ID : 820662      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 9 2 1 2 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
Protein NP_566486.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 3,  cyto_nucl 3,  cysk_nucl 3,  nucl_plas 3  (predict for NP_566486.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_566486.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
UBP25
ath-r.7
for
UBP25
ath-m.9
for
UBP25
ath-e.2
for
UBP25
ath-m.4.bio
for
UBP25
ath-m.4.hor
for
UBP25
ath-m.4.lig
for
UBP25
ath-m.4.str
for
UBP25
ath-m.4.tis
for
UBP25
gma-u.5
for
100775539
gma-u.5
for
100820436
vvi-u.5
for
100253154
ppo-u.5
for
18095524
ppo-u.5
for
7472360
mtr-u.5
for
25487057
sly-u.5
for
101243726
osa-u.5
for
4339279
zma-u.5
for
103645919
zma-u.5
for
103635830
zma-u.5
for
100281515


Ortholog ID: 7566
Species ath bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol UBP25 LOC103870030 LOC106394159 LOC106387061 LOC107928360 LOC107909171 LOC102618430 LOC100775539 LOC100820436 LOC100253154 LOC18095524 LOC7472360 LOC25487057 LOC101243726 LOC102579938 LOC107807783 LOC107760698 LOC4339279 LOC103635830 LOC100281515 LOC123062316 LOC123139538 LOC123447496 LOC110430166 LOC100843351
Function* ubiquitin-specific protease 25 ubiquitin carboxyl-terminal hydrolase 25 ubiquitin carboxyl-terminal hydrolase 25-like ubiquitin carboxyl-terminal hydrolase 25 ubiquitin carboxyl-terminal hydrolase 25 ubiquitin carboxyl-terminal hydrolase 25 ubiquitin carboxyl-terminal hydrolase 25 ubiquitin carboxyl-terminal hydrolase 25 ubiquitin carboxyl-terminal hydrolase 25 ubiquitin carboxyl-terminal hydrolase 25 ubiquitin carboxyl-terminal hydrolase 25 ubiquitin carboxyl-terminal hydrolase 25 ubiquitin carboxyl-terminal hydrolase 25 ubiquitin carboxyl-terminal hydrolase 25 ubiquitin carboxyl-terminal hydrolase 25-like ubiquitin carboxyl-terminal hydrolase 25-like ubiquitin carboxyl-terminal hydrolase 25 ubiquitin carboxyl-terminal hydrolase 25 ubiquitin carboxyl-terminal hydrolase 25 UBP25 ubiquitin carboxyl-terminal hydrolase 25 ubiquitin carboxyl-terminal hydrolase 25 ubiquitin carboxyl-terminal hydrolase 25 ubiquitin carboxyl-terminal hydrolase 25 ubiquitin carboxyl-terminal hydrolase 25
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 5
bna03018 RNA degradation 3
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma04120 Ubiquitin mediated proteolysis 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820662 103870030 106394159 106387061 107928360 107909171 102618430 100775539 100820436 100253154 18095524 7472360 25487057 101243726 102579938 107807783 107760698 4339279 103635830 100281515 123062316 123139538 123447496 110430166 100843351
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