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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G15605   nucleic acid binding protein 
 ath-m.4.bio   AT3G15605   nucleic acid binding protein 
 ath-m.4.hor   AT3G15605   nucleic acid binding protein 
 ath-m.4.lig   AT3G15605   nucleic acid binding protein 
 ath-m.4.str   AT3G15605   nucleic acid binding protein 
 ath-m.4.tis   AT3G15605   nucleic acid binding protein 
 ath-u.5   AT5G11470   bromo-adjacent homology (BAH) domain-containing protein 
 bra-r.6   103846715   protein ANTI-SILENCING 1 
 bra-r.6   103855910   protein ANTI-SILENCING 1 
 bna-r.1   106372404   protein ANTI-SILENCING 1 
 ghi-r.1   121202871   protein ANTI-SILENCING 1 
 ghi-r.1   107960811   protein ANTI-SILENCING 1 
 ghi-r.1   107953827   protein ANTI-SILENCING 1 
 cit-r.1   102619539   protein ANTI-SILENCING 1-like 
 cit-r.1   102619306   hypothetical protein 
 gma-u.5   100783899   protein ANTI-SILENCING 1 
 gma-u.5   100803692   protein ANTI-SILENCING 1 
 vvi-u.5   104880252   protein ANTI-SILENCING 1 
 vvi-u.5   100852811   protein ANTI-SILENCING 1 
 ppo-u.5   7495726   protein ANTI-SILENCING 1 
 ppo-u.5   7462951   protein ANTI-SILENCING 1 
 sly-u.5   101268537   protein ANTI-SILENCING 1 
 sly-u.5   101265200   protein ANTI-SILENCING 1-like 
 sot-r.1   102597563   uncharacterized LOC102597563 
 sot-r.1   102582649   uncharacterized LOC102582649 
 nta-r.1   107794874   protein ANTI-SILENCING 1-like 
 nta-r.1   107780082   protein ANTI-SILENCING 1 
 nta-r.1   107775739   protein ANTI-SILENCING 1-like 
 osa-u.5   4327732   protein ANTI-SILENCING 1 
 zma-u.5   100191737   uncharacterized LOC100191737 
 tae-r.2   123044217   protein ANTI-SILENCING 1 
 tae-r.2   123187954   protein ANTI-SILENCING 1 
 tae-r.2   123052096   protein ANTI-SILENCING 1 
 hvu-r.1   123425318   protein ANTI-SILENCING 1-like 
 sbi-r.1   8067616   protein ANTI-SILENCING 1 
 sbi-r.1   110433342   protein ANTI-SILENCING 1-like 
 bdi-r.1   100841585   protein ANTI-SILENCING 1 

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Top 50 coexpressed genes to AT3G15605 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G15605 (ath-m.9 coexpression data)

CoexMap"820802"


athAT3G15605 | Entrez gene ID : 820802      
Species ath bra bna ghi cit gma vvi ppo sly sot nta osa zma tae hvu sbi bdi cre mtr
Paralog 7 2 1 3 2 2 2 2 2 2 3 1 1 3 1 2 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_001118639.1 [sequence] [blastp]
NP_001118640.1 [sequence] [blastp]
NP_001189902.1 [sequence] [blastp]
NP_188181.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1,  plas 1,  vacu 1  (predict for NP_001118639.1)
cyto 6,  nucl 2,  chlo 1,  plas 1,  vacu 1  (predict for NP_001118640.1)
cyto 5,  nucl 4,  chlo 1,  vacu 1  (predict for NP_001189902.1)
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_188181.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001118639.1)
other 8  (predict for NP_001118640.1)
other 9  (predict for NP_001189902.1)
other 8  (predict for NP_188181.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G15605
ath-m.4.bio
for
AT3G15605
ath-m.4.hor
for
AT3G15605
ath-m.4.lig
for
AT3G15605
ath-m.4.str
for
AT3G15605
ath-m.4.tis
for
AT3G15605
ath-u.5
for
AT5G11470
bra-r.6
for
103846715
bra-r.6
for
103855910
bna-r.1
for
106372404
ghi-r.1
for
121202871
ghi-r.1
for
107960811
ghi-r.1
for
107953827
cit-r.1
for
102619539
cit-r.1
for
102619306
gma-u.5
for
100783899
gma-u.5
for
100803692
vvi-u.5
for
104880252
vvi-u.5
for
100852811
ppo-u.5
for
7495726
ppo-u.5
for
7462951
sly-u.5
for
101268537
sly-u.5
for
101265200
sot-r.1
for
102597563
sot-r.1
for
102582649
nta-r.1
for
107794874
nta-r.1
for
107780082
nta-r.1
for
107775739
osa-u.5
for
4327732
zma-u.5
for
100191737
tae-r.2
for
123044217
tae-r.2
for
123187954
tae-r.2
for
123052096
hvu-r.1
for
123425318
sbi-r.1
for
8067616
sbi-r.1
for
110433342
bdi-r.1
for
100841585


Ortholog ID: 3102
Species ath bra bra bna bna ghi ghi ghi cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi sbi bdi
Symbol AT5G11470 LOC103846715 LOC103855910 LOC106372404 LOC106399831 LOC107953827 LOC107906938 LOC107900503 LOC102619539 LOC102619306 LOC100783899 LOC100803692 LOC104880252 LOC100852811 LOC7495726 LOC7462951 LOC11443740 LOC11436097 LOC101268537 LOC101265200 LOC102597563 LOC102582649 LOC107794874 LOC107780082 LOC107768576 LOC4327732 LOC100191737 LOC123044217 LOC123187954 LOC123052096 LOC123425318 LOC8067616 LOC110433342 LOC100841585
Function* bromo-adjacent homology (BAH) domain-containing protein protein ANTI-SILENCING 1 protein ANTI-SILENCING 1 protein ANTI-SILENCING 1 protein ANTI-SILENCING 1-like protein ANTI-SILENCING 1 protein ANTI-SILENCING 1 protein ANTI-SILENCING 1 protein ANTI-SILENCING 1-like hypothetical protein protein ANTI-SILENCING 1 protein ANTI-SILENCING 1 protein ANTI-SILENCING 1 protein ANTI-SILENCING 1 protein ANTI-SILENCING 1 protein ANTI-SILENCING 1 protein ANTI-SILENCING 1 protein ANTI-SILENCING 1 protein ANTI-SILENCING 1 protein ANTI-SILENCING 1-like uncharacterized LOC102597563 uncharacterized LOC102582649 protein ANTI-SILENCING 1-like protein ANTI-SILENCING 1 protein ANTI-SILENCING 1 protein ANTI-SILENCING 1 uncharacterized LOC100191737 protein ANTI-SILENCING 1 protein ANTI-SILENCING 1 protein ANTI-SILENCING 1 protein ANTI-SILENCING 1-like protein ANTI-SILENCING 1 protein ANTI-SILENCING 1-like protein ANTI-SILENCING 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00591 Linoleic acid metabolism 4
bna00592 alpha-Linolenic acid metabolism 4
bna04075 Plant hormone signal transduction 2
bna04626 Plant-pathogen interaction 2
bna00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 5
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 11
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00260 Glycine, serine and threonine metabolism 3
gma00270 Cysteine and methionine metabolism 3
gma00750 Vitamin B6 metabolism 3
gma01200 Carbon metabolism 3
gma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 4
vvi03410 Base excision repair 2
vvi03420 Nucleotide excision repair 2
vvi03440 Homologous recombination 2
vvi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 2
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 3
nta03410 Base excision repair 3
nta03420 Nucleotide excision repair 3
nta03440 Homologous recombination 3
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 3
nta03410 Base excision repair 3
nta03420 Nucleotide excision repair 3
nta03440 Homologous recombination 3
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu03022 Basal transcription factors 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831018 103846715 103855910 106372404 106399831 107953827 107906938 107900503 102619539 102619306 100783899 100803692 104880252 100852811 7495726 7462951 11443740 11436097 101268537 101265200 102597563 102582649 107794874 107780082 107768576 4327732 100191737 123044217 123187954 123052096 123425318 8067616 110433342 100841585
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