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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G18870   Mitochondrial transcription termination factor family protein 
 ath-r.7   AT3G18870   Mitochondrial transcription termination factor family protein 
 ath-m.9   AT3G18870   Mitochondrial transcription termination factor family protein 
 ath-e.2   AT3G18870   Mitochondrial transcription termination factor family protein 
 ath-m.4.bio   AT3G18870   Mitochondrial transcription termination factor family protein 
 ath-m.4.hor   AT3G18870   Mitochondrial transcription termination factor family protein 
 ath-m.4.lig   AT3G18870   Mitochondrial transcription termination factor family protein 
 ath-m.4.str   AT3G18870   Mitochondrial transcription termination factor family protein 
 ath-m.4.tis   AT3G18870   Mitochondrial transcription termination factor family protein 
 gma-u.5   100812333   transcription termination factor MTEF1, chloroplastic 
 vvi-u.5   100853221   transcription termination factor MTEF1, chloroplastic 
 ppo-u.5   7461195   transcription termination factor MTEF1, chloroplastic 
 mtr-u.5   11442578   transcription termination factor MTEF1, chloroplastic 
 mtr-u.5   120577068   transcription termination factor MTEF1, chloroplastic 
 sly-u.5   101266172   transcription termination factor MTEF1, chloroplastic 

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Top 50 coexpressed genes to AT3G18870 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G18870 (ath-u.5 coexpression data)

CoexMap"821420"


athAT3G18870 | Entrez gene ID : 821420      
Species ath gma vvi ppo mtr sly bdi hvu bra cit bna sbi ghi osa sot nta cre tae zma
Paralog 9 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071472 [list] [network] cellular response to salt stress  (42 genes)  IMP  
GO CC
GO:0042646 [list] [network] plastid nucleoid  (55 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA ISM  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (800 genes)  IEA  
Protein NP_188517.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for NP_188517.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_188517.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G18870
ath-r.7
for
AT3G18870
ath-m.9
for
AT3G18870
ath-e.2
for
AT3G18870
ath-m.4.bio
for
AT3G18870
ath-m.4.hor
for
AT3G18870
ath-m.4.lig
for
AT3G18870
ath-m.4.str
for
AT3G18870
ath-m.4.tis
for
AT3G18870
gma-u.5
for
100812333
vvi-u.5
for
100853221
ppo-u.5
for
7461195
mtr-u.5
for
11442578
mtr-u.5
for
120577068
sly-u.5
for
101266172


Ortholog ID: 12655
Species ath bra bna ghi ghi cit gma vvi ppo mtr mtr sly sot nta
Symbol AT3G18870 LOC103869515 BNAC05G34150D LOC107898758 LOC107945162 LOC102620107 LOC100812333 LOC100853221 LOC7461195 LOC120577068 LOC11442578 LOC101266172 LOC107058496 LOC107793268
Function* Mitochondrial transcription termination factor family protein transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic uncharacterized LOC107058496 transcription termination factor MTEF1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00790 Folate biosynthesis 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 4
sot00190 Oxidative phosphorylation 2
sot01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821420 103869515 106446849 107898758 107945162 102620107 100812333 100853221 7461195 120577068 11442578 101266172 107058496 107793268
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