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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G19460   Reticulon family protein 
 ath-r.7   AT3G19460   Reticulon family protein 
 ath-m.9   AT3G19460   Reticulon family protein 
 ath-e.2   AT3G19460   Reticulon family protein 
 ath-m.4.bio   AT3G19460   Reticulon family protein 
 ath-m.4.hor   AT3G19460   Reticulon family protein 
 ath-m.4.lig   AT3G19460   Reticulon family protein 
 ath-m.4.str   AT3G19460   Reticulon family protein 
 ath-m.4.tis   AT3G19460   Reticulon family protein 
 ath-u.5   AT2G15280   Reticulon family protein 
 gma-u.5   100527732   reticulon-like protein B11 
 gma-u.5   100527029   reticulon-like protein 
 vvi-u.5   100255583   reticulon family protein-like 
 ppo-u.5   7490062   reticulon-like protein B11 
 ppo-u.5   7492064   reticulon-like protein B11 
 mtr-u.5   25485415   reticulon-like protein B11 
 sly-u.5   101251723   reticulon-like protein B11 
 osa-u.5   4337349   reticulon-like protein B11 
 zma-u.5   100273152   uncharacterized LOC100273152 
 zma-u.5   100283586   reticulon 

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Top 50 coexpressed genes to AT3G19460 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G19460 (ath-u.5 coexpression data)

CoexMap"821480"


athAT3G19460 | Entrez gene ID : 821480      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 10 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_001078186.1 [sequence] [blastp]
NP_001319591.1 [sequence] [blastp]
NP_001325444.1 [sequence] [blastp]
NP_001325445.1 [sequence] [blastp]
NP_001325446.1 [sequence] [blastp]
NP_001325447.1 [sequence] [blastp]
NP_566635.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  cyto_plas 4,  E.R. 2  (predict for NP_001078186.1)
plas 6,  cyto_plas 4,  E.R. 2  (predict for NP_001319591.1)
plas 7,  golg 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_001325444.1)
plas 6,  chlo 1,  golg 1  (predict for NP_001325445.1)
plas 6,  chlo 1,  golg 1  (predict for NP_001325446.1)
plas 7,  golg 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_001325447.1)
plas 6,  chlo 1,  golg 1  (predict for NP_566635.1)
Subcellular
localization
TargetP
mito 2  (predict for NP_001078186.1)
mito 2  (predict for NP_001319591.1)
other 5  (predict for NP_001325444.1)
other 5  (predict for NP_001325445.1)
other 5  (predict for NP_001325446.1)
other 5  (predict for NP_001325447.1)
other 5  (predict for NP_566635.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G19460
ath-r.7
for
AT3G19460
ath-m.9
for
AT3G19460
ath-e.2
for
AT3G19460
ath-m.4.bio
for
AT3G19460
ath-m.4.hor
for
AT3G19460
ath-m.4.lig
for
AT3G19460
ath-m.4.str
for
AT3G19460
ath-m.4.tis
for
AT3G19460
ath-u.5
for
AT2G15280
gma-u.5
for
100527732
gma-u.5
for
100527029
vvi-u.5
for
100255583
ppo-u.5
for
7490062
ppo-u.5
for
7492064
mtr-u.5
for
25485415
sly-u.5
for
101251723
osa-u.5
for
4337349
zma-u.5
for
100273152
zma-u.5
for
100283586


Ortholog ID: 5053
Species ath ath bra bra bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol AT2G15280 AT3G19460 LOC103869452 LOC103859813 LOC106424371 LOC107908880 LOC107894302 LOC102608456 LOC100527732 LOC100527029 LOC100255583 LOC7490062 LOC7492064 LOC25485415 LOC101251723 LOC102603492 LOC107816758 LOC107789452 LOC4337349 LOC100273152 LOC100283586 LOC123047289 LOC123190948 LOC123428435 LOC8070298 LOC100837843
Function* Reticulon family protein Reticulon family protein reticulon-like protein B11 reticulon-like protein B11 reticulon-like protein B11 reticulon-like protein B11 reticulon-like protein B11 reticulon-like protein B11 reticulon-like protein B11 reticulon-like protein reticulon family protein-like reticulon-like protein B11 reticulon-like protein B11 reticulon-like protein B11 reticulon-like protein B11 reticulon-like protein B11 reticulon-like protein B11 reticulon-like protein B11 reticulon-like protein B11 uncharacterized LOC100273152 reticulon reticulon-like protein B11 reticulon-like protein B11 reticulon-like protein B11 reticulon-like protein B11 reticulon-like protein B11
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 3
bra04145 Phagosome 3
bra00190 Oxidative phosphorylation 2
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 10
ghi04144 Endocytosis 4
ghi00071 Fatty acid degradation 2
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit04130 SNARE interactions in vesicular transport 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 5
mtr04145 Phagosome 4
mtr03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00510 N-Glycan biosynthesis 2
sly03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
sot00510 N-Glycan biosynthesis 2
sot00513 Various types of N-glycan biosynthesis 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 5
nta00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma04141 Protein processing in endoplasmic reticulum 3
zma03060 Protein export 3
zma04145 Phagosome 3
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03060 Protein export 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03420 Nucleotide excision repair 4
bdi04141 Protein processing in endoplasmic reticulum 4
bdi03040 Spliceosome 2
bdi03082 ATP-dependent chromatin remodeling 2
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816017 821480 103869452 103859813 106424371 107908880 107894302 102608456 100527732 100527029 100255583 7490062 7492064 25485415 101251723 102603492 107816758 107789452 4337349 100273152 100283586 123047289 123190948 123428435 8070298 100837843
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