Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   FIE   Transducin/WD40 repeat-like superfamily protein 
 ath-r.7   FIE   Transducin/WD40 repeat-like superfamily protein 
 ath-m.9   FIE   Transducin/WD40 repeat-like superfamily protein 
 ath-e.2   FIE   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.bio   FIE   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.hor   FIE   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.lig   FIE   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.str   FIE   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.tis   FIE   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100785120   polycomb group protein FIE1 
 gma-u.5   100127417   FIE 
 vvi-u.5   100246903   polycomb group protein FIE1 
 ppo-u.5   18095896   polycomb group protein FIE1 
 mtr-u.5   25482354   polycomb group protein FIE1 
 sly-u.5   FIE   fertilization-independent endosperm protein 
 osa-u.5   4344620   polycomb group protein FIE1-like 
 zma-u.5   542076   fertilization independent endosperm 2 
 zma-u.5   542075   fertilization independent endosperm 1 

close


Top 50 coexpressed genes to FIE (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to FIE (ath-u.5 coexpression data)

CoexMap"821622"


athFIE | Entrez gene ID : 821622      
Species ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 9 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03083 [list] [network] Polycomb repressive complex (65 genes)
GO BP
GO:0045815 [list] [network] transcription initiation-coupled chromatin remodeling  (6 genes)  IMP  
GO:0141044 [list] [network] epigenetic programming in the endosperm  (8 genes)  IMP  
GO:2000014 [list] [network] regulation of endosperm development  (10 genes)  IMP  
GO:0010048 [list] [network] vernalization response  (18 genes)  IMP  
GO:0009910 [list] [network] negative regulation of flower development  (50 genes)  IMP  
GO:0009409 [list] [network] response to cold  (436 genes)  IEP  
GO:0022414 [list] [network] reproductive process  (1746 genes)  IMP  
GO CC
GO:0043078 [list] [network] polar nucleus  (6 genes)  IDA  
GO:0005677 [list] [network] chromatin silencing complex  (8 genes)  IDA  
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0001222 [list] [network] transcription corepressor binding  (13 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_188710.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 3,  cyto_nucl 3  (predict for NP_188710.1)
Subcellular
localization
TargetP
other 8  (predict for NP_188710.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
FIE

.
ath-r.7
for
FIE

.
ath-m.9
for
FIE

.
ath-e.2
for
FIE

.
ath-m.4.bio
for
FIE

.
ath-m.4.hor
for
FIE

.
ath-m.4.lig
for
FIE

.
ath-m.4.str
for
FIE

.
ath-m.4.tis
for
FIE

.
gma-u.5
for
100785120

.
gma-u.5
for
100127417

.
vvi-u.5
for
100246903

.
ppo-u.5
for
18095896

.
mtr-u.5
for
25482354

.
sly-u.5
for
FIE

.
osa-u.5
for
4344620

.
zma-u.5
for
542076

.
zma-u.5
for
542075

.


Ortholog ID: 4082
Species ath gma sly osa zma zma bra vvi ppo mtr tae hvu ghi ghi bna cre sbi sot cit bdi nta nta
Symbol FIE LOC100795288 FIE LOC4344620 LOC542075 LOC542076 LOC103869280 LOC100246903 LOC18095896 LOC25482354 LOC123167651 LOC123409904 LOC107920781 LOC107895196 LOC106365963 CHLRE_16g693750v5 LOC8067799 LOC102577673 LOC102631462 LOC100838165 LOC107794471 LOC107766652
Function* Transducin/WD40 repeat-like superfamily protein polycomb group protein FIE1 fertilization-independent endosperm protein polycomb group protein FIE1-like fertilization independent endosperm 1 fertilization independent endosperm 2 polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM polycomb group protein FIE1 polycomb group protein FIE1 polycomb group protein FIE1 polycomb group protein FIE1 polycomb group protein FIE1 polycomb group protein FIE1 polycomb group protein FIE1 polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM-like uncharacterized protein polycomb group protein FIE2 fertilization-independent endosperm protein polycomb group protein FIE1 polycomb group protein FIE2 polycomb group protein FIE1 polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 4
ath03040 Spliceosome 2
ath03082 ATP-dependent chromatin remodeling 2
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00380 Tryptophan metabolism 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
zma03013 Nucleocytoplasmic transport 2
zma03083 Polycomb repressive complex 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03018 RNA degradation 3
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi03013 Nucleocytoplasmic transport 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi03013 Nucleocytoplasmic transport 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 4
bna03013 Nucleocytoplasmic transport 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 3
cre03410 Base excision repair 3
cre03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 2
nta00460 Cyanoamino acid metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821622 100795288 100136877 4344620 542075 542076 103869280 100246903 18095896 25482354 123167651 123409904 107920781 107895196 106365963 66056835 8067799 102577673 102631462 100838165 107794471 107766652
The preparation time of this page was 0.1 [sec].