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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PGR7   proton gradient regulation 7 
 ath-r.7   PGR7   proton gradient regulation 7 
 ath-m.9   PGR7   proton gradient regulation 7 
 ath-e.2   PGR7   proton gradient regulation 7 
 ath-m.4.bio   PGR7   proton gradient regulation 7 
 ath-m.4.hor   PGR7   proton gradient regulation 7 
 ath-m.4.lig   PGR7   proton gradient regulation 7 
 ath-m.4.str   PGR7   proton gradient regulation 7 
 ath-m.4.tis   PGR7   proton gradient regulation 7 
 gma-u.5   100814950   uncharacterized LOC100814950 
 gma-u.5   100499817   glutamyl-tRNA reductase-binding protein, chloroplastic 
 vvi-u.5   100260424   glutamyl-tRNA reductase-binding protein, chloroplastic 
 ppo-u.5   7469481   glutamyl-tRNA reductase-binding protein, chloroplastic 
 mtr-u.5   11434386   glutamyl-tRNA reductase-binding protein, chloroplastic 
 sly-u.5   101265521   glutamyl-tRNA reductase-binding protein, chloroplastic 
 osa-u.5   4345098   glutamyl-tRNA reductase-binding protein, chloroplastic 
 zma-u.5   100216583   uncharacterized LOC100216583 
 zma-u.5   100278396   uncharacterized LOC100278396 

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Top 50 coexpressed genes to PGR7 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PGR7 (ath-u.5 coexpression data)

CoexMap"821673"


athPGR7 | Entrez gene ID : 821673      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 9 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0070455 [list] [network] positive regulation of heme biosynthetic process  (1 genes)  IMP  
GO:0009767 [list] [network] photosynthetic electron transport chain  (35 genes)  IMP  
GO:0033014 [list] [network] tetrapyrrole biosynthetic process  (46 genes)  IMP  
GO:0009791 [list] [network] post-embryonic development  (1579 genes)  IMP  
GO CC
GO:0009534 [list] [network] chloroplast thylakoid  (417 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  IDA  
GO:0032991 [list] [network] protein-containing complex  (1548 genes)  IPI  
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA  
GO MF
GO:0043495 [list] [network] protein-membrane adaptor activity  (11 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_566678.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  cyto 1,  extr 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_566678.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_566678.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PGR7
ath-r.7
for
PGR7
ath-m.9
for
PGR7
ath-e.2
for
PGR7
ath-m.4.bio
for
PGR7
ath-m.4.hor
for
PGR7
ath-m.4.lig
for
PGR7
ath-m.4.str
for
PGR7
ath-m.4.tis
for
PGR7
gma-u.5
for
100814950
gma-u.5
for
100499817
vvi-u.5
for
100260424
ppo-u.5
for
7469481
mtr-u.5
for
11434386
sly-u.5
for
101265521
osa-u.5
for
4345098
zma-u.5
for
100216583
zma-u.5
for
100278396


Ortholog ID: 7587
Species ath bra bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol PGR7 LOC103869199 LOC103835340 LOC125603088 LOC106401943 LOC107906351 LOC121203104 LOC102629818 LOC100814950 LOC100499817 LOC100260424 LOC7469481 LOC11434386 LOC101265521 LOC102578175 LOC107781666 LOC107818351 LOC4345098 LOC100216583 LOC100278396 LOC123156038 LOC123164487 LOC123409838 LOC8073256 LOC100831263 CHLRE_03g156600v5
Function* proton gradient regulation 7 glutamyl-tRNA reductase-binding protein, chloroplastic glutamyl-tRNA reductase-binding protein, chloroplastic glutamyl-tRNA reductase-binding protein, chloroplastic-like glutamyl-tRNA reductase-binding protein, chloroplastic glutamyl-tRNA reductase-binding protein, chloroplastic glutamyl-tRNA reductase-binding protein, chloroplastic glutamyl-tRNA reductase-binding protein, chloroplastic uncharacterized LOC100814950 glutamyl-tRNA reductase-binding protein, chloroplastic glutamyl-tRNA reductase-binding protein, chloroplastic glutamyl-tRNA reductase-binding protein, chloroplastic glutamyl-tRNA reductase-binding protein, chloroplastic glutamyl-tRNA reductase-binding protein, chloroplastic glutamyl-tRNA reductase-binding protein, chloroplastic glutamyl-tRNA reductase-binding protein, chloroplastic-like glutamyl-tRNA reductase-binding protein, chloroplastic-like glutamyl-tRNA reductase-binding protein, chloroplastic uncharacterized LOC100216583 uncharacterized LOC100278396 glutamyl-tRNA reductase-binding protein, chloroplastic glutamyl-tRNA reductase-binding protein, chloroplastic glutamyl-tRNA reductase-binding protein, chloroplastic glutamyl-tRNA reductase-binding protein, chloroplastic glutamyl-tRNA reductase-binding protein, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 8
ath01240 Biosynthesis of cofactors 8
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
ppo03010 Ribosome 3
ppo01230 Biosynthesis of amino acids 2
ppo01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
nta01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 5
nta00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 4
osa01240 Biosynthesis of cofactors 4
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 4
zma01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 5
tae00230 Purine metabolism 4
tae00730 Thiamine metabolism 4
tae01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 8
tae01240 Biosynthesis of cofactors 4
tae00860 Porphyrin metabolism 3
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 3
bdi01240 Biosynthesis of cofactors 3
bdi03040 Spliceosome 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 9
cre01240 Biosynthesis of cofactors 5
cre03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821673 103869199 103835340 125603088 106401943 107906351 121203104 102629818 100814950 100499817 100260424 7469481 11434386 101265521 102578175 107781666 107818351 4345098 100216583 100278396 123156038 123164487 123409838 8073256 100831263 66052743
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