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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G24255   RNA-directed DNA polymerase (reverse transcriptase)-related family protein 
 ath-r.7   AT3G24255   RNA-directed DNA polymerase (reverse transcriptase)-related family protein 
 ath-e.2   AT3G24255   RNA-directed DNA polymerase (reverse transcriptase)-related family protein 
 ath-u.5   AT3G23910   reverse transcriptase-like protein 
 gma-u.5   100785081   uncharacterized LOC100785081 
 vvi-u.5   100245254   uncharacterized LOC100245254 
 ppo-u.5   7461649   uncharacterized LOC7461649 
 mtr-u.5   112420433   uncharacterized LOC112420433 
 sly-u.5   101244321   uncharacterized LOC101244321 
 osa-u.5   4335626   uncharacterized LOC4335626 
 zma-u.5   100381501   uncharacterized LOC100381501 

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Top 50 coexpressed genes to AT3G24255 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G24255 (ath-u.5 coexpression data)

CoexMap"822013"


athAT3G24255 | Entrez gene ID : 822013      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001154643.1 [sequence] [blastp]
NP_001327638.1 [sequence] [blastp]
NP_001327639.1 [sequence] [blastp]
NP_001327640.1 [sequence] [blastp]
NP_001327641.1 [sequence] [blastp]
NP_001327642.1 [sequence] [blastp]
NP_001327643.1 [sequence] [blastp]
NP_189068.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  chlo 1,  cysk 1  (predict for NP_001154643.1)
nucl 6,  cyto_nucl 4,  cyto 1,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  E.R._vacu 1,  mito_plas 1  (predict for NP_001327638.1)
nucl 5,  cyto 2,  plas 1,  chlo 1,  mito 1,  chlo_mito 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1  (predict for NP_001327639.1)
nucl 5,  cyto 2,  plas 1,  chlo 1,  mito 1,  chlo_mito 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1  (predict for NP_001327640.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001327641.1)
nucl 4,  cyto 3,  chlo 1,  mito 1,  plas 1,  cysk 1,  chlo_mito 1,  cysk_plas 1,  mito_plas 1  (predict for NP_001327642.1)
nucl 5,  cyto 3,  cysk 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001327643.1)
nucl 5,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for NP_189068.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001154643.1)
other 7  (predict for NP_001327638.1)
scret 6,  other 5  (predict for NP_001327639.1)
scret 6,  other 5  (predict for NP_001327640.1)
other 8  (predict for NP_001327641.1)
scret 6,  other 5  (predict for NP_001327642.1)
other 7  (predict for NP_001327643.1)
other 7  (predict for NP_189068.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G24255
ath-r.7
for
AT3G24255
ath-e.2
for
AT3G24255
ath-u.5
for
AT3G23910
gma-u.5
for
100785081
vvi-u.5
for
100245254
ppo-u.5
for
7461649
mtr-u.5
for
112420433
sly-u.5
for
101244321
osa-u.5
for
4335626
zma-u.5
for
100381501


Ortholog ID: 8960
Species ath ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol AT3G23910 AT3G24255 LOC103828695 LOC106453312 LOC106402678 LOC107903893 LOC107905708 LOC102620884 LOC100785081 LOC100245254 LOC7461649 LOC112420433 LOC101244321 LOC102592291 LOC107797016 LOC107784044 LOC4335626 LOC100381501 LOC123189028 LOC123053121 LOC123426507 LOC8070944 LOC100830271
Function* reverse transcriptase-like protein RNA-directed DNA polymerase (reverse transcriptase)-related family protein uncharacterized LOC103828695 uncharacterized LOC106453312 uncharacterized LOC106402678 uncharacterized LOC107903893 uncharacterized LOC107905708 uncharacterized LOC102620884 uncharacterized LOC100785081 uncharacterized LOC100245254 uncharacterized LOC7461649 uncharacterized LOC112420433 uncharacterized LOC101244321 uncharacterized LOC102592291 uncharacterized LOC107797016 uncharacterized LOC107784044 uncharacterized LOC4335626 uncharacterized LOC100381501 uncharacterized LOC123189028 uncharacterized LOC123053121 uncharacterized LOC123426507 uncharacterized LOC8070944 uncharacterized LOC100830271
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
bna03040 Spliceosome 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 2
mtr04148 Efferocytosis 2
mtr04517 IgSF CAM signaling 2
mtr04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04814 Motor proteins 2
sly03410 Base excision repair 2
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 4
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821974 822013 103828695 106453312 106402678 107903893 107905708 102620884 100785081 100245254 7461649 112420433 101244321 102592291 107797016 107784044 4335626 100381501 123189028 123053121 123426507 8070944 100830271
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