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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G47180   RING/U-box superfamily protein 
 ath-m.4.bio   AT3G47180   RING/U-box superfamily protein 
 ath-m.4.hor   AT3G47180   RING/U-box superfamily protein 
 ath-m.4.lig   AT3G47180   RING/U-box superfamily protein 
 ath-m.4.str   AT3G47180   RING/U-box superfamily protein 
 ath-m.4.tis   AT3G47180   RING/U-box superfamily protein 
 gma-u.5   100777284   E3 ubiquitin ligase BIG BROTHER-related-like 
 mtr-u.5   11422201   E3 ubiquitin ligase BIG BROTHER-related 

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Top 50 coexpressed genes to AT3G47180 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G47180 (ath-m.9 coexpression data)

CoexMap"823871"


athAT3G47180 | Entrez gene ID : 823871      
Species ath gma mtr tae osa zma bdi vvi sbi ppo bna sly nta cre sot hvu ghi cit bra
Paralog 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0046621 [list] [network] negative regulation of organ growth  (8 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (170 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (268 genes)  IEA  
Protein NP_190302.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 3,  cyto_nucl 3,  extr 2  (predict for NP_190302.1)
Subcellular
localization
TargetP
other 7  (predict for NP_190302.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G47180

.
ath-m.4.bio
for
AT3G47180

.
ath-m.4.hor
for
AT3G47180

.
ath-m.4.lig
for
AT3G47180

.
ath-m.4.str
for
AT3G47180

.
ath-m.4.tis
for
AT3G47180

.
gma-u.5
for
100777284

.
mtr-u.5
for
11422201

.


Ortholog ID: 12438
Species gma bra mtr ghi cit
Symbol LOC100777284 LOC103873588 LOC11422201 LOC121230378 LOC102613833
Function* E3 ubiquitin ligase BIG BROTHER-related-like protein SGT1 homolog A E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
gma00565 Ether lipid metabolism 2
gma04144 Endocytosis 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00564 Glycerophospholipid metabolism 2
bra00565 Ether lipid metabolism 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 2
ghi00480 Glutathione metabolism 2
ghi01200 Carbon metabolism 2
ghi00500 Starch and sucrose metabolism 2
ghi00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100777284 103873588 11422201 121230378 102613833
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