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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   RIP3   ROP interactive partner 4 
 ath-r.7   RIP3   ROP interactive partner 4 
 ath-m.9   RIP3   ROP interactive partner 4 
 ath-e.2   RIP3   ROP interactive partner 4 
 ath-m.4.bio   RIP3   ROP interactive partner 4 
 ath-m.4.hor   RIP3   ROP interactive partner 4 
 ath-m.4.lig   RIP3   ROP interactive partner 4 
 ath-m.4.str   RIP3   ROP interactive partner 4 
 ath-m.4.tis   RIP3   ROP interactive partner 4 
 bra-r.6   103841260   interactor of constitutive active ROPs 5 
 bna-r.1   106433939   interactor of constitutive active ROPs 5-like 
 bna-r.1   106434806   interactor of constitutive active ROPs 5-like 

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Top 50 coexpressed genes to RIP3 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RIP3 (ath-u.5 coexpression data)

CoexMap"824503"


athRIP3 | Entrez gene ID : 824503      
Species ath bra bna sbi ghi cre mtr tae cit sot bdi vvi ppo sly zma osa gma nta hvu
Paralog 9 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043622 [list] [network] cortical microtubule organization  (50 genes)  IDA  
GO:0009664 [list] [network] plant-type cell wall organization  (170 genes)  IDA  
GO CC
GO:0005874 [list] [network] microtubule  (116 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001326317.1 [sequence] [blastp]
NP_001326318.1 [sequence] [blastp]
NP_001326319.1 [sequence] [blastp]
NP_001326320.1 [sequence] [blastp]
NP_001326321.1 [sequence] [blastp]
NP_001326322.1 [sequence] [blastp]
NP_190903.2 [sequence] [blastp]
NP_974423.1 [sequence] [blastp]
NP_974424.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 1,  cysk 1,  E.R._plas 1,  plas 1,  E.R. 1,  mito 1,  vacu 1,  cyto_pero 1  (predict for NP_001326317.1)
nucl 6,  cyto 2,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for NP_001326318.1)
nucl 4,  cyto 1,  cysk 1,  E.R._plas 1,  plas 1,  E.R. 1,  mito 1,  vacu 1,  cyto_pero 1  (predict for NP_001326319.1)
nucl 6,  cyto 2,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for NP_001326320.1)
chlo 6,  mito 3,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_001326321.1)
nucl 4,  cysk 1,  E.R._plas 1,  plas 1,  E.R. 1,  chlo 1,  mito 1,  vacu 1,  golg 1,  chlo_mito 1  (predict for NP_001326322.1)
nucl 6,  cyto 2,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for NP_190903.2)
nucl 6,  cyto 1,  mito 1  (predict for NP_974423.1)
nucl 6,  cyto 1,  mito 1  (predict for NP_974424.1)
Subcellular
localization
TargetP
chlo 3  (predict for NP_001326317.1)
chlo 7  (predict for NP_001326318.1)
chlo 3  (predict for NP_001326319.1)
chlo 7  (predict for NP_001326320.1)
chlo 4,  other 4  (predict for NP_001326321.1)
chlo 4  (predict for NP_001326322.1)
chlo 7  (predict for NP_190903.2)
chlo 7  (predict for NP_974423.1)
chlo 7  (predict for NP_974424.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
RIP3
ath-r.7
for
RIP3
ath-m.9
for
RIP3
ath-e.2
for
RIP3
ath-m.4.bio
for
RIP3
ath-m.4.hor
for
RIP3
ath-m.4.lig
for
RIP3
ath-m.4.str
for
RIP3
ath-m.4.tis
for
RIP3
bra-r.6
for
103841260
bna-r.1
for
106433939
bna-r.1
for
106434806


Ortholog ID: 22717
Species ath bra bna bna
Symbol RIP3 LOC103841260 LOC106433939 LOC106434806
Function* ROP interactive partner 4 interactor of constitutive active ROPs 5 interactor of constitutive active ROPs 5-like interactor of constitutive active ROPs 5-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03022 Basal transcription factors 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824503 103841260 106433939 106434806
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