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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G55020   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-r.7   AT3G55020   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.9   AT3G55020   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-e.2   AT3G55020   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.4.bio   AT3G55020   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.4.hor   AT3G55020   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.4.lig   AT3G55020   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.4.str   AT3G55020   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-m.4.tis   AT3G55020   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-u.5   AT2G37290   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-u.5   AT2G39280   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 gma-u.5   100805928   TBC1 domain family member 8B 
 gma-u.5   100809869   TBC1 domain family member 10B 
 gma-u.5   100775232   ecotropic viral integration site 5 ortholog 
 vvi-u.5   100255322   uncharacterized LOC100255322 
 ppo-u.5   7457898   uncharacterized LOC7457898 
 ppo-u.5   7458625   uncharacterized LOC7458625 
 ppo-u.5   18100252   uncharacterized LOC18100252 
 mtr-u.5   11446021   TBC1 domain family member 8B 
 mtr-u.5   25484063   ecotropic viral integration site 5 protein homolog 
 sly-u.5   101256081   uncharacterized LOC101256081 
 sly-u.5   101262244   uncharacterized LOC101262244 
 osa-u.5   4332461   uncharacterized LOC4332461 
 osa-u.5   4339042   uncharacterized LOC4339042 
 zma-u.5   100278125   uncharacterized LOC100278125 
 zma-u.5   103630445   TBC1 domain family member 10B 
 zma-u.5   103634483   ecotropic viral integration site 5 protein homolog 

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Top 50 coexpressed genes to AT3G55020 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G55020 (ath-u.5 coexpression data)

CoexMap"824668"


athAT3G55020 | Entrez gene ID : 824668      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 11 3 1 3 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001319752.1 [sequence] [blastp]
NP_001326345.1 [sequence] [blastp]
NP_001326346.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  plas 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1,  E.R._plas 1  (predict for NP_001319752.1)
chlo 8,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for NP_001326345.1)
chlo 7,  nucl 1,  plas 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1,  E.R._plas 1  (predict for NP_001326346.1)
Subcellular
localization
TargetP
chlo 3  (predict for NP_001319752.1)
chlo 3  (predict for NP_001326345.1)
chlo 3  (predict for NP_001326346.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G55020

.
ath-r.7
for
AT3G55020

.
ath-m.9
for
AT3G55020

.
ath-e.2
for
AT3G55020

.
ath-m.4.bio
for
AT3G55020

.
ath-m.4.hor
for
AT3G55020

.
ath-m.4.lig
for
AT3G55020

.
ath-m.4.str
for
AT3G55020

.
ath-m.4.tis
for
AT3G55020

.
ath-u.5
for
AT2G37290

.
ath-u.5
for
AT2G39280

.
gma-u.5
for
100805928

.
gma-u.5
for
100809869

.
gma-u.5
for
100775232

.
vvi-u.5
for
100255322

.
ppo-u.5
for
7457898

.
ppo-u.5
for
7458625

.
ppo-u.5
for
18100252

.
mtr-u.5
for
11446021

.
mtr-u.5
for
25484063

.
sly-u.5
for
101256081

.
sly-u.5
for
101262244

.
osa-u.5
for
4332461

.
osa-u.5
for
4339042

.
zma-u.5
for
100278125

.
zma-u.5
for
103630445

.
zma-u.5
for
103634483

.


Ortholog ID: 1699
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT2G39280 AT3G55020 LOC100805928 LOC100775232 LOC101256081 LOC101262244 LOC4339042 LOC4332461 LOC103634483 LOC100284494 LOC103867210 LOC103841417 LOC100255322 LOC18100252 LOC7458625 LOC11446021 LOC25484063 LOC123092512 LOC123059492 LOC123448958 LOC123445163 LOC106447700 LOC106396356 CHLRE_02g077700v5 LOC8081453 LOC8072559 LOC102579749 LOC102578585 LOC102614554 LOC102606977 LOC100840960 LOC100831523 LOC107761523 LOC107778454
Function* Ypt/Rab-GAP domain of gyp1p superfamily protein Ypt/Rab-GAP domain of gyp1p superfamily protein TBC1 domain family member 8B ecotropic viral integration site 5 ortholog uncharacterized LOC101256081 uncharacterized LOC101262244 uncharacterized LOC4339042 uncharacterized LOC4332461 ecotropic viral integration site 5 protein homolog rhodopsin-like receptor ecotropic viral integration site 5 protein homolog rab GTPase-activating protein 1 uncharacterized LOC100255322 uncharacterized LOC18100252 uncharacterized LOC7458625 TBC1 domain family member 8B ecotropic viral integration site 5 protein homolog ecotropic viral integration site 5 protein homolog ecotropic viral integration site 5 protein homolog TBC domain-containing protein C215.01 ecotropic viral integration site 5 protein homolog TBC1 domain family member 10B ecotropic viral integration site 5 protein homolog uncharacterized protein rab GTPase-activating protein 1 TBC1 domain family member 10B TBC1 domain family member 8B-like rab GTPase-activating protein 1-like uncharacterized LOC102614554 uncharacterized LOC102606977 TBC1 domain family member 2A TBC1 domain family member 8B uncharacterized LOC107761523 uncharacterized LOC107778454
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00600 Sphingolipid metabolism 2
gma00190 Oxidative phosphorylation 2
gma04145 Phagosome 2
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
gma04144 Endocytosis 2
gma05100 Bacterial invasion of epithelial cells 2
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00511 Other glycan degradation 3
vvi04814 Motor proteins 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 2
tae04144 Endocytosis 2
tae05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi04142 Lysosome 2
sbi05100 Bacterial invasion of epithelial cells 2
sbi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818513 824668 100805928 100775232 101256081 101262244 4339042 4332461 103634483 100284494 103867210 103841417 100255322 18100252 7458625 11446021 25484063 123092512 123059492 123448958 123445163 106447700 106396356 5727237 8081453 8072559 102579749 102578585 102614554 102606977 100840960 100831523 107761523 107778454
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