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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G55080   SET domain-containing protein 
 ath-r.7   AT3G55080   SET domain-containing protein 
 ath-m.9   AT3G55080   SET domain-containing protein 
 ath-e.2   AT3G55080   SET domain-containing protein 
 ath-m.4.bio   AT3G55080   SET domain-containing protein 
 ath-m.4.hor   AT3G55080   SET domain-containing protein 
 ath-m.4.lig   AT3G55080   SET domain-containing protein 
 ath-m.4.str   AT3G55080   SET domain-containing protein 
 ath-m.4.tis   AT3G55080   SET domain-containing protein 
 gma-u.5   100818002   fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic 
 vvi-u.5   100263808   ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 
 ppo-u.5   18101376   ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 
 mtr-u.5   11440742   ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 
 sly-u.5   101257971   ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 
 osa-u.5   107276114   fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic 

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Top 50 coexpressed genes to AT3G55080 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G55080 (ath-u.5 coexpression data)

CoexMap"824674"


athAT3G55080 | Entrez gene ID : 824674      
Species ath gma vvi ppo mtr sly osa tae hvu zma ghi bdi cit bra cre sbi bna nta sot
Paralog 9 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_001030864.1 [sequence] [blastp]
NP_001326790.1 [sequence] [blastp]
NP_001326791.1 [sequence] [blastp]
NP_001326792.1 [sequence] [blastp]
NP_191068.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  mito 3,  chlo 2,  cyto_nucl 2,  cyto_mito 2  (predict for NP_001030864.1)
mito 4,  cyto_mito 3,  chlo 2,  nucl 2  (predict for NP_001326790.1)
cyto 7,  chlo 1,  nucl 1,  vacu 1,  cysk 1,  cysk_nucl 1  (predict for NP_001326791.1)
cyto 7,  chlo 1,  nucl 1,  vacu 1,  cysk 1,  cysk_nucl 1  (predict for NP_001326792.1)
chlo 4,  chlo_mito 4,  nucl 2,  mito 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_191068.2)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for NP_001030864.1)
mito 7,  other 3  (predict for NP_001326790.1)
other 8  (predict for NP_001326791.1)
other 8  (predict for NP_001326792.1)
mito 6  (predict for NP_191068.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G55080

.
ath-r.7
for
AT3G55080

.
ath-m.9
for
AT3G55080

.
ath-e.2
for
AT3G55080

.
ath-m.4.bio
for
AT3G55080

.
ath-m.4.hor
for
AT3G55080

.
ath-m.4.lig
for
AT3G55080

.
ath-m.4.str
for
AT3G55080

.
ath-m.4.tis
for
AT3G55080

.
gma-u.5
for
100818002

.
vvi-u.5
for
100263808

.
ppo-u.5
for
18101376

.
mtr-u.5
for
11440742

.
sly-u.5
for
101257971

.
osa-u.5
for
107276114

.


Ortholog ID: 11346
Species ath gma sly osa bra vvi ppo mtr tae hvu ghi ghi bna bna cre sot cit cit
Symbol AT3G55080 LOC100818002 LOC101257971 LOC107276114 LOC103841421 LOC100263808 LOC18101376 LOC11440742 LOC123072906 LOC123445748 LOC107926068 LOC107960984 LOC106412135 LOC106433978 CHLRE_03g164650v5 LOC102594470 LOC102622516 LOC102611704
Function* SET domain-containing protein fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic actin-histidine N-methyltransferase uncharacterized protein ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic uncharacterized LOC102622516 fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00540 Lipopolysaccharide biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 4
bna00030 Pentose phosphate pathway 2
bna00052 Galactose metabolism 2
bna00230 Purine metabolism 2
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 4
bna00030 Pentose phosphate pathway 2
bna00052 Galactose metabolism 2
bna00230 Purine metabolism 2
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824674 100818002 101257971 107276114 103841421 100263808 18101376 11440742 123072906 123445748 107926068 107960984 106412135 106433978 5729049 102594470 102622516 102611704
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