Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PDE329   calcium homeostasis regulator 
 ath-r.7   PDE329   calcium homeostasis regulator 
 ath-m.9   PDE329   calcium homeostasis regulator 
 ath-e.2   PDE329   calcium homeostasis regulator 
 ath-m.4.bio   PDE329   calcium homeostasis regulator 
 ath-m.4.hor   PDE329   calcium homeostasis regulator 
 ath-m.4.lig   PDE329   calcium homeostasis regulator 
 ath-m.4.str   PDE329   calcium homeostasis regulator 
 ath-m.4.tis   PDE329   calcium homeostasis regulator 
 bra-r.6   103841437   photosystem I assembly factor PSA3, chloroplastic 
 bna-r.1   106433976   photosystem I assembly factor PSA3, chloroplastic-like 
 bna-r.1   BNAC04G25570D   photosystem I assembly factor PSA3, chloroplastic 
 bna-r.1   106409612   photosystem I assembly factor PSA3, chloroplastic-like 
 ghi-r.1   107924820   photosystem I assembly factor PSA3, chloroplastic 
 ghi-r.1   107911780   photosystem I assembly factor PSA3, chloroplastic 
 cit-r.1   102623220   photosystem I assembly factor PSA3, chloroplastic 
 gma-u.5   100798132   photosystem I assembly factor PSA3, chloroplastic 
 gma-u.5   100795176   photosystem I assembly factor PSA3, chloroplastic 
 vvi-u.5   100266403   photosystem I assembly factor PSA3, chloroplastic 
 ppo-u.5   7495928   photosystem I assembly factor PSA3, chloroplastic 
 mtr-u.5   25495174   photosystem I assembly factor PSA3, chloroplastic 
 sly-u.5   101249783   photosystem I assembly factor PSA3, chloroplastic 
 sot-r.1   107060317   uncharacterized LOC107060317 
 sot-r.1   102577914   calcium homeostasis regulator CHoR1 
 nta-r.1   107827292   photosystem I assembly factor PSA3, chloroplastic-like 
 nta-r.1   107786806   photosystem I assembly factor PSA3, chloroplastic 
 osa-u.5   4339380   photosystem I assembly factor PSA3, chloroplastic 
 zma-u.5   100273037   calcium homeostasis regulator CHoR1 
 tae-r.2   123182699   photosystem I assembly factor PSA3, chloroplastic 
 tae-r.2   123141065   photosystem I assembly factor PSA3, chloroplastic 
 tae-r.2   123063744   photosystem I assembly factor PSA3, chloroplastic 
 hvu-r.1   123417995   photosystem I assembly factor PSA3, chloroplastic 
 sbi-r.1   8085957   uncharacterized LOC8085957 
 bdi-r.1   100820900   photosystem I assembly factor PSA3, chloroplastic 
 cre-r.1   CHLRE_03g183400v5   uncharacterized protein 

close


Top 50 coexpressed genes to PDE329 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to PDE329 (ath-u.5 coexpression data)

CoexMap"824691"


athPDE329 | Entrez gene ID : 824691      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 3 2 1 2 1 1 1 1 2 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048564 [list] [network] photosystem I assembly  (17 genes)  IMP  
GO CC
GO:0098572 [list] [network] stromal side of plastid thylakoid membrane  (6 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_191085.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  vacu 1,  mito 1,  nucl 1,  extr 1,  E.R._vacu 1  (predict for NP_191085.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_191085.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PDE329
ath-r.7
for
PDE329
ath-m.9
for
PDE329
ath-e.2
for
PDE329
ath-m.4.bio
for
PDE329
ath-m.4.hor
for
PDE329
ath-m.4.lig
for
PDE329
ath-m.4.str
for
PDE329
ath-m.4.tis
for
PDE329
bra-r.6
for
103841437
bna-r.1
for
106433976
bna-r.1
for
BNAC04G25570D
bna-r.1
for
106409612
ghi-r.1
for
107924820
ghi-r.1
for
107911780
cit-r.1
for
102623220
gma-u.5
for
100798132
gma-u.5
for
100795176
vvi-u.5
for
100266403
ppo-u.5
for
7495928
mtr-u.5
for
25495174
sly-u.5
for
101249783
sot-r.1
for
107060317
sot-r.1
for
102577914
nta-r.1
for
107827292
nta-r.1
for
107786806
osa-u.5
for
4339380
zma-u.5
for
100273037
tae-r.2
for
123182699
tae-r.2
for
123141065
tae-r.2
for
123063744
hvu-r.1
for
123417995
sbi-r.1
for
8085957
bdi-r.1
for
100820900
cre-r.1
for
CHLRE_03g183400v5


Ortholog ID: 7625
Species ath bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol PDE329 LOC103841437 BNAC04G25570D BNAA09G34890D LOC106445345 LOC107924820 LOC107911780 LOC102623220 LOC100798132 LOC100795176 LOC100266403 LOC7495928 LOC25495174 LOC101249783 LOC107060317 LOC102577914 LOC107827292 LOC107786806 LOC4339380 LOC100273037 LOC123182699 LOC123141065 LOC123063744 LOC123417995 LOC8085957 LOC100820900 CHLRE_03g183400v5
Function* calcium homeostasis regulator photosystem I assembly factor PSA3, chloroplastic photosystem I assembly factor PSA3, chloroplastic photosystem I assembly factor PSA3, chloroplastic photosystem I assembly factor PSA3, chloroplastic-like photosystem I assembly factor PSA3, chloroplastic photosystem I assembly factor PSA3, chloroplastic photosystem I assembly factor PSA3, chloroplastic photosystem I assembly factor PSA3, chloroplastic photosystem I assembly factor PSA3, chloroplastic photosystem I assembly factor PSA3, chloroplastic photosystem I assembly factor PSA3, chloroplastic photosystem I assembly factor PSA3, chloroplastic photosystem I assembly factor PSA3, chloroplastic uncharacterized LOC107060317 calcium homeostasis regulator CHoR1 photosystem I assembly factor PSA3, chloroplastic-like photosystem I assembly factor PSA3, chloroplastic photosystem I assembly factor PSA3, chloroplastic calcium homeostasis regulator CHoR1 photosystem I assembly factor PSA3, chloroplastic photosystem I assembly factor PSA3, chloroplastic photosystem I assembly factor PSA3, chloroplastic photosystem I assembly factor PSA3, chloroplastic uncharacterized LOC8085957 photosystem I assembly factor PSA3, chloroplastic uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 5
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 5
vvi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 3
ppo00520 Amino sugar and nucleotide sugar metabolism 2
ppo01250 Biosynthesis of nucleotide sugars 2
ppo00052 Galactose metabolism 2
ppo00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta01200 Carbon metabolism 4
nta04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 5
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824691 103841437 106367518 106416132 106445345 107924820 107911780 102623220 100798132 100795176 100266403 7495928 25495174 101249783 107060317 102577914 107827292 107786806 4339380 100273037 123182699 123141065 123063744 123417995 8085957 100820900 5728469
The preparation time of this page was 0.2 [sec].