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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PRA1.B1   prenylated RAB acceptor 1.B1 
 ath-r.7   PRA1.B1   prenylated RAB acceptor 1.B1 
 ath-m.9   PRA1.B1   prenylated RAB acceptor 1.B1 
 ath-e.2   PRA1.B1   prenylated RAB acceptor 1.B1 
 ath-m.4.bio   PRA1.B1   prenylated RAB acceptor 1.B1 
 ath-m.4.hor   PRA1.B1   prenylated RAB acceptor 1.B1 
 ath-m.4.lig   PRA1.B1   prenylated RAB acceptor 1.B1 
 ath-m.4.str   PRA1.B1   prenylated RAB acceptor 1.B1 
 ath-m.4.tis   PRA1.B1   prenylated RAB acceptor 1.B1 
 ath-u.5   PRA1.B4   prenylated RAB acceptor 1.B4 
 ath-u.5   PRA1.B2   prenylated RAB acceptor 1.B2 
 ath-u.5   PRA1.B3   prenylated RAB acceptor 1.B3 
 bra-r.6   103855716   PRA1 family protein B6 
 bra-r.6   103866953   PRA1 family protein B2 
 bna-r.1   106436117   PRA1 family protein B4 
 bna-r.1   106352906   PRA1 family protein B1 
 bna-r.1   111200336   PRA1 family protein B1-like 
 ghi-r.1   107912160   PRA1 family protein B4 
 ghi-r.1   107933780   PRA1 family protein B3 
 ghi-r.1   107931835   PRA1 family protein B3 
 cit-r.1   102608834   PRA1 family protein B1 
 cit-r.1   102630357   PRA1 family protein B4 
 gma-u.5   100804273   PRA1 family protein B4 
 gma-u.5   102669622   PRA1 family protein B4 
 vvi-u.5   100241569   PRA1 family protein B3 
 vvi-u.5   100244851   PRA1 family protein B4 
 ppo-u.5   7488723   PRA1 family protein B4 
 ppo-u.5   7487339   PRA1 family protein B4 
 mtr-u.5   11414518   PRA1 family protein B4 
 mtr-u.5   11421277   PRA1 family protein B3 
 sly-u.5   101263325   PRA1 family protein B3 
 sly-u.5   101245109   PRA1 family protein B4 
 sly-u.5   101266253   PRA1 family protein B4 
 sot-r.1   102578666   PRA1 family protein B3-like 
 sot-r.1   102591195   PRA1 family protein B4-like 
 sot-r.1   102591405   PRA1 family protein B4-like 
 nta-r.1   107775554   PRA1 family protein B4-like 
 nta-r.1   107779395   PRA1 family protein B1 
 nta-r.1   107785989   PRA1 family protein B4 
 osa-u.5   4339088   PRA1 family protein B2 
 zma-u.5   100282720   prenylated Rab receptor 2 
 zma-u.5   100192789   prenylated Rab receptor 2 
 zma-u.5   100285355   prenylated Rab receptor 2 
 tae-r.2   123182353   PRA1 family protein B2 
 tae-r.2   123091713   PRA1 family protein B2 
 tae-r.2   123079616   PRA1 family protein B2 
 hvu-r.1   123448135   PRA1 family protein B2-like 
 hvu-r.1   123444845   PRA1 family protein B2-like 
 hvu-r.1   123440583   PRA1 family protein B2-like 
 sbi-r.1   8055498   PRA1 family protein B2 
 sbi-r.1   8057732   PRA1 family protein B2 
 sbi-r.1   8067585   PRA1 family protein B2 
 bdi-r.1   100826229   PRA1 family protein B2 
 bdi-r.1   100820987   PRA1 family protein B2 
 bdi-r.1   100840152   PRA1 family protein B2-like 
 cre-r.1   CHLRE_01g012500v5   uncharacterized protein 

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Top 50 coexpressed genes to PRA1.B1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PRA1.B1 (ath-u.5 coexpression data)

CoexMap"824777"


athPRA1.B1 | Entrez gene ID : 824777      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 12 2 3 3 2 2 2 2 2 3 3 3 1 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016192 [list] [network] vesicle-mediated transport  (246 genes)  IDA  
GO CC
GO:0000138 [list] [network] Golgi trans cisterna  (87 genes)  HDA  
GO:0005783 [list] [network] endoplasmic reticulum  (897 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  ISM  
GO MF
Protein NP_001190100.1 [sequence] [blastp]
NP_001319766.1 [sequence] [blastp]
NP_001327380.1 [sequence] [blastp]
NP_191170.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  plas 2,  mito 1,  E.R._plas 1  (predict for NP_001190100.1)
chlo 6,  plas 2,  mito 1,  E.R._plas 1  (predict for NP_001319766.1)
chlo 6,  plas 2,  mito 1,  E.R._plas 1  (predict for NP_001327380.1)
chlo 6,  plas 2,  mito 1,  E.R._plas 1  (predict for NP_191170.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001190100.1)
chlo 8  (predict for NP_001319766.1)
chlo 8  (predict for NP_001327380.1)
chlo 8  (predict for NP_191170.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PRA1.B1
ath-r.7
for
PRA1.B1
ath-m.9
for
PRA1.B1
ath-e.2
for
PRA1.B1
ath-m.4.bio
for
PRA1.B1
ath-m.4.hor
for
PRA1.B1
ath-m.4.lig
for
PRA1.B1
ath-m.4.str
for
PRA1.B1
ath-m.4.tis
for
PRA1.B1
ath-u.5
for
PRA1.B4
ath-u.5
for
PRA1.B2
ath-u.5
for
PRA1.B3
bra-r.6
for
103855716
bra-r.6
for
103866953
bna-r.1
for
106436117
bna-r.1
for
106352906
bna-r.1
for
111200336
ghi-r.1
for
107912160
ghi-r.1
for
107933780
ghi-r.1
for
107931835
cit-r.1
for
102608834
cit-r.1
for
102630357
gma-u.5
for
100804273
gma-u.5
for
102669622
vvi-u.5
for
100241569
vvi-u.5
for
100244851
ppo-u.5
for
7488723
ppo-u.5
for
7487339
mtr-u.5
for
11414518
mtr-u.5
for
11421277
sly-u.5
for
101263325
sly-u.5
for
101245109
sly-u.5
for
101266253
sot-r.1
for
102578666
sot-r.1
for
102591195
sot-r.1
for
102591405
nta-r.1
for
107775554
nta-r.1
for
107779395
nta-r.1
for
107785989
osa-u.5
for
4339088
zma-u.5
for
100282720
zma-u.5
for
100192789
zma-u.5
for
100285355
tae-r.2
for
123182353
tae-r.2
for
123091713
tae-r.2
for
123079616
hvu-r.1
for
123448135
hvu-r.1
for
123444845
hvu-r.1
for
123440583
sbi-r.1
for
8055498
sbi-r.1
for
8057732
sbi-r.1
for
8067585
bdi-r.1
for
100826229
bdi-r.1
for
100820987
bdi-r.1
for
100840152
cre-r.1
for
CHLRE_01g012500v5


Ortholog ID: 827
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma vvi vvi ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi bdi cre
Symbol PRA1.B1 PRA1.B2 PRA1.B6 LOC103866953 LOC103830035 LOC103855406 LOC106436117 LOC106352906 LOC106433822 LOC107937071 LOC107962131 LOC121209607 LOC102608834 LOC102630357 LOC102669622 LOC100241569 LOC100244851 LOC7487339 LOC112325190 LOC11414518 LOC11421277 LOC101263325 LOC101245109 LOC101266253 LOC102578666 LOC102591195 LOC102591405 LOC107775554 LOC107785989 LOC107787062 LOC4339088 LOC100282720 LOC100192789 LOC100273220 LOC123182353 LOC123091713 LOC123071259 LOC123448135 LOC123444845 LOC123398769 LOC8067585 LOC110430312 LOC100826229 LOC100820987 LOC100840152 CHLRE_01g012500v5
Function* prenylated RAB acceptor 1.B1 prenylated RAB acceptor 1.B2 prenylated RAB acceptor 1.B6 PRA1 family protein B2 PRA1 family protein B1 PRA1 family protein B5 PRA1 family protein B4 PRA1 family protein B1 PRA1 family protein B5 PRA1 family protein B4 PRA1 family protein B1 PRA1 family protein B4 PRA1 family protein B1 PRA1 family protein B4 PRA1 family protein B4 PRA1 family protein B3 PRA1 family protein B4 PRA1 family protein B4 PRA1 family protein B3 PRA1 family protein B4 PRA1 family protein B3 PRA1 family protein B3 PRA1 family protein B4 PRA1 family protein B4 PRA1 family protein B3-like PRA1 family protein B4-like PRA1 family protein B4-like PRA1 family protein B4-like PRA1 family protein B4 PRA1 family protein B4-like PRA1 family protein B2 prenylated Rab receptor 2 prenylated Rab receptor 2 uncharacterized LOC100273220 PRA1 family protein B2 PRA1 family protein B2 PRA1 family protein B2 PRA1 family protein B2-like PRA1 family protein B2-like PRA1 family protein B2-like PRA1 family protein B2 PRA1 family protein B2-like PRA1 family protein B2 PRA1 family protein B2 PRA1 family protein B2-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01250 Biosynthesis of nucleotide sugars 5
bra00520 Amino sugar and nucleotide sugar metabolism 3
bra00541 Biosynthesis of various nucleotide sugars 3
bra01240 Biosynthesis of cofactors 3
bra00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00520 Amino sugar and nucleotide sugar metabolism 8
bna01250 Biosynthesis of nucleotide sugars 8
bna00040 Pentose and glucuronate interconversions 6
bna00053 Ascorbate and aldarate metabolism 6
bna00541 Biosynthesis of various nucleotide sugars 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00541 Biosynthesis of various nucleotide sugars 4
ghi01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00270 Cysteine and methionine metabolism 2
ppo00670 One carbon pool by folate 2
ppo00541 Biosynthesis of various nucleotide sugars 2
ppo01240 Biosynthesis of cofactors 2
ppo01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly00510 N-Glycan biosynthesis 2
sly00513 Various types of N-glycan biosynthesis 2
sly03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00510 N-Glycan biosynthesis 2
sly00513 Various types of N-glycan biosynthesis 2
sly04141 Protein processing in endoplasmic reticulum 2
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00510 N-Glycan biosynthesis 2
sot00513 Various types of N-glycan biosynthesis 2
sot04141 Protein processing in endoplasmic reticulum 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 2
tae04075 Plant hormone signal transduction 2
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
tae00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae00480 Glutathione metabolism 3
tae01232 Nucleotide metabolism 3
tae03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01250 Biosynthesis of nucleotide sugars 3
hvu00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04130 SNARE interactions in vesicular transport 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00350 Tyrosine metabolism 3
hvu00360 Phenylalanine metabolism 3
hvu00380 Tryptophan metabolism 3
hvu00901 Indole alkaloid biosynthesis 3
hvu00950 Isoquinoline alkaloid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00591 Linoleic acid metabolism 3
sbi00592 alpha-Linolenic acid metabolism 2
sbi01230 Biosynthesis of amino acids 2
sbi00670 One carbon pool by folate 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 2
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01250 Biosynthesis of nucleotide sugars 3
bdi00051 Fructose and mannose metabolism 2
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00600 Sphingolipid metabolism 2
cre04382 Cornified envelope formation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824777 818631 830602 103866953 103830035 103855406 106436117 106352906 106433822 107937071 107962131 121209607 102608834 102630357 102669622 100241569 100244851 7487339 112325190 11414518 11421277 101263325 101245109 101266253 102578666 102591195 102591405 107775554 107785989 107787062 4339088 100282720 100192789 100273220 123182353 123091713 123071259 123448135 123444845 123398769 8067585 110430312 100826229 100820987 100840152 5715056
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