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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G56750   plant/protein 
 ath-r.7   AT3G56750   plant/protein 
 ath-m.9   AT3G56750   plant/protein 
 ath-e.2   AT3G56750   plant/protein 
 ath-m.4.bio   AT3G56750   plant/protein 
 ath-m.4.hor   AT3G56750   plant/protein 
 ath-m.4.lig   AT3G56750   plant/protein 
 ath-m.4.str   AT3G56750   plant/protein 
 ath-m.4.tis   AT3G56750   plant/protein 
 ath-u.5   AT2G41150   plant/protein 
 bra-r.6   103841573   uncharacterized LOC103841573 
 bra-r.6   103866534   uncharacterized LOC103866534 
 bra-r.6   103830066   uncharacterized LOC103830066 
 bna-r.1   BNAA05G02010D   uncharacterized BNAA05G02010D 
 bna-r.1   106445899   uncharacterized LOC106445899 
 bna-r.1   BNACNNG20370D   uncharacterized BNACNNG20370D 
 ghi-r.1   107941353   uncharacterized LOC107941353 
 cit-r.1   102612379   uncharacterized LOC102612379 
 gma-u.5   100796131   uncharacterized LOC100796131 
 gma-u.5   100814636   uncharacterized LOC100814636 
 vvi-u.5   100251727   uncharacterized LOC100251727 
 ppo-u.5   7473561   uncharacterized LOC7473561 
 ppo-u.5   7458919   uncharacterized LOC7458919 
 mtr-u.5   25502286   uncharacterized LOC25502286 
 sly-u.5   101266881   uncharacterized LOC101266881 
 sot-r.1   102590827   uncharacterized LOC102590827 
 nta-r.1   107805448   uncharacterized LOC107805448 
 nta-r.1   107804396   uncharacterized LOC107804396 
 osa-u.5   4332916   uncharacterized LOC4332916 
 osa-u.5   4344064   uncharacterized LOC4344064 
 zma-u.5   100193408   calcium ion binding 
 zma-u.5   100382085   calcium ion binding 
 tae-r.2   123051899   uncharacterized LOC123051899 
 tae-r.2   123044024   uncharacterized LOC123044024 
 tae-r.2   123187780   uncharacterized LOC123187780 
 hvu-r.1   123425069   uncharacterized LOC123425069 
 sbi-r.1   8073086   uncharacterized LOC8073086 
 sbi-r.1   8082604   uncharacterized LOC8082604 
 bdi-r.1   100830143   uncharacterized LOC100830143 
 bdi-r.1   100843213   uncharacterized LOC100843213 

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Top 50 coexpressed genes to AT3G56750 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G56750 (ath-u.5 coexpression data)

CoexMap"824842"


athAT3G56750 | Entrez gene ID : 824842      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 1 1 2 1 2 1 1 1 2 2 2 3 1 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0000138 [list] [network] Golgi trans cisterna  (87 genes)  HDA  
GO:0005802 [list] [network] trans-Golgi network  (279 genes)  HDA  
GO:0005768 [list] [network] endosome  (359 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0016757 [list] [network] glycosyltransferase activity  (554 genes)  ISM  
Protein NP_191234.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 2,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_191234.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_191234.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G56750
ath-r.7
for
AT3G56750
ath-m.9
for
AT3G56750
ath-e.2
for
AT3G56750
ath-m.4.bio
for
AT3G56750
ath-m.4.hor
for
AT3G56750
ath-m.4.lig
for
AT3G56750
ath-m.4.str
for
AT3G56750
ath-m.4.tis
for
AT3G56750
ath-u.5
for
AT2G41150
bra-r.6
for
103841573
bra-r.6
for
103866534
bra-r.6
for
103830066
bna-r.1
for
BNAA05G02010D
bna-r.1
for
106445899
bna-r.1
for
BNACNNG20370D
ghi-r.1
for
107941353
cit-r.1
for
102612379
gma-u.5
for
100796131
gma-u.5
for
100814636
vvi-u.5
for
100251727
ppo-u.5
for
7473561
ppo-u.5
for
7458919
mtr-u.5
for
25502286
sly-u.5
for
101266881
sot-r.1
for
102590827
nta-r.1
for
107805448
nta-r.1
for
107804396
osa-u.5
for
4332916
osa-u.5
for
4344064
zma-u.5
for
100193408
zma-u.5
for
100382085
tae-r.2
for
123051899
tae-r.2
for
123044024
tae-r.2
for
123187780
hvu-r.1
for
123425069
sbi-r.1
for
8073086
sbi-r.1
for
8082604
bdi-r.1
for
100830143
bdi-r.1
for
100843213


Ortholog ID: 5972
Species ath ath bra bra bra bna bna ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma zma tae tae tae hvu sbi sbi bdi bdi
Symbol AT3G56750 AT2G41150 LOC103841573 LOC103866534 LOC103830066 LOC106445899 LOC106368062 LOC107941353 LOC102612379 LOC100796131 LOC100814636 LOC100251727 LOC7473561 LOC7458919 LOC25502286 LOC101266881 LOC102590827 LOC107805448 LOC107804396 LOC4332916 LOC4344064 LOC100193408 LOC100382085 LOC123051899 LOC123044024 LOC123187780 LOC123425069 LOC8073086 LOC8082604 LOC100830143 LOC100843213
Function* plant/protein plant/protein uncharacterized LOC103841573 uncharacterized LOC103866534 uncharacterized LOC103830066 uncharacterized LOC106445899 uncharacterized LOC106368062 uncharacterized LOC107941353 uncharacterized LOC102612379 uncharacterized LOC100796131 uncharacterized LOC100814636 uncharacterized LOC100251727 uncharacterized LOC7473561 uncharacterized LOC7458919 uncharacterized LOC25502286 uncharacterized LOC101266881 uncharacterized LOC102590827 uncharacterized LOC107805448 uncharacterized LOC107804396 uncharacterized LOC4332916 uncharacterized LOC4344064 calcium ion binding calcium ion binding uncharacterized LOC123051899 uncharacterized LOC123044024 uncharacterized LOC123187780 uncharacterized LOC123425069 uncharacterized LOC8073086 uncharacterized LOC8082604 uncharacterized LOC100830143 uncharacterized LOC100843213
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
ath04075 Plant hormone signal transduction 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 4
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 3
cit00510 N-Glycan biosynthesis 2
cit03410 Base excision repair 2
cit04016 MAPK signaling pathway - plant 2
cit00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00520 Amino sugar and nucleotide sugar metabolism 5
ppo01250 Biosynthesis of nucleotide sugars 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00620 Pyruvate metabolism 2
mtr00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00620 Pyruvate metabolism 6
sly01200 Carbon metabolism 6
sly00010 Glycolysis / Gluconeogenesis 4
sly00020 Citrate cycle (TCA cycle) 4
sly00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00561 Glycerolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 3
nta01250 Biosynthesis of nucleotide sugars 3
nta00260 Glycine, serine and threonine metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03250 Viral life cycle - HIV-1 2
zma03040 Spliceosome 2
zma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00513 Various types of N-glycan biosynthesis 3
zma00510 N-Glycan biosynthesis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
tae04142 Lysosome 3
tae04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03020 RNA polymerase 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 3
bdi00770 Pantothenate and CoA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824842 818714 103841573 103866534 103830066 106445899 106368062 107941353 102612379 100796131 100814636 100251727 7473561 7458919 25502286 101266881 102590827 107805448 107804396 4332916 4344064 100193408 100382085 123051899 123044024 123187780 123425069 8073086 8082604 100830143 100843213
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