ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT3G60450	Phosphoglycerate mutase family protein
ath-r.7	AT3G60450	Phosphoglycerate mutase family protein
ath-m.9	AT3G60450	Phosphoglycerate mutase family protein
ath-e.2	AT3G60450	Phosphoglycerate mutase family protein
ath-m.4.bio	AT3G60450	Phosphoglycerate mutase family protein
ath-m.4.hor	AT3G60450	Phosphoglycerate mutase family protein
ath-m.4.lig	AT3G60450	Phosphoglycerate mutase family protein
ath-m.4.str	AT3G60450	Phosphoglycerate mutase family protein
ath-m.4.tis	AT3G60450	Phosphoglycerate mutase family protein
ath-u.5	AT4G07455	uncharacterized protein
ath-u.5	AT3G60415	phosphoglycerate mutase family protein
bra-r.6	103830256	uncharacterized LOC103830256
bra-r.6	103862883	uncharacterized LOC103862883
bra-r.6	103831373	uncharacterized LOC103831373
bna-r.1	111215149	uncharacterized LOC111215149
bna-r.1	125576220	uncharacterized LOC125576220
bna-r.1	111215150	uncharacterized LOC111215150
ghi-r.1	107918776	uncharacterized LOC107918776
ghi-r.1	107911877	uncharacterized LOC107911877
ghi-r.1	107895333	uncharacterized LOC107895333
cit-r.1	102611404	hypothetical protein
gma-u.5	100811704	uncharacterized LOC100811704
gma-u.5	100794512	uncharacterized LOC100794512
vvi-u.5	100247848	uncharacterized LOC100247848
ppo-u.5	18105134	uncharacterized LOC18105134
ppo-u.5	7453933	uncharacterized LOC7453933
mtr-u.5	11432418	uncharacterized LOC11432418
mtr-u.5	25498157	uncharacterized LOC25498157
mtr-u.5	25481479	uncharacterized LOC25481479
sly-u.5	101243998	Phosphoglycerate mutase family protein
sot-r.1	102593878	uncharacterized LOC102593878
nta-r.1	107800746	uncharacterized LOC107800746
nta-r.1	107824229	uncharacterized LOC107824229
osa-u.5	4331288	uncharacterized LOC4331288
zma-u.5	100278237	uncharacterized LOC100278237
tae-r.2	123093929	uncharacterized LOC123093929
tae-r.2	123099163	uncharacterized LOC123099163
tae-r.2	123106125	uncharacterized LOC123106125
hvu-r.1	123450006	uncharacterized LOC123450006
sbi-r.1	8059540	uncharacterized LOC8059540
bdi-r.1	112268585	uncharacterized LOC112268585
cre-r.1	CHLRE_03g165900v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

Protein

NP_001326035.1 [sequence] [blastp]
NP_191604.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, nucl 3, cyto 2, mito 1, cysk_nucl 1, nucl_plas 1	(predict for NP_001326035.1)
cyto 4, chlo 2, nucl 2, extr 1, chlo_mito 1	(predict for NP_191604.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001326035.1)
other 8	(predict for NP_191604.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT3G60450	ath-r.7 for AT3G60450	ath-m.9 for AT3G60450	ath-e.2 for AT3G60450	ath-m.4.bio for AT3G60450	ath-m.4.hor for AT3G60450	ath-m.4.lig for AT3G60450	ath-m.4.str for AT3G60450	ath-m.4.tis for AT3G60450	ath-u.5 for AT4G07455	ath-u.5 for AT3G60415	bra-r.6 for 103830256	bra-r.6 for 103862883	bra-r.6 for 103831373	bna-r.1 for 111215149	bna-r.1 for 125576220	bna-r.1 for 111215150	ghi-r.1 for 107918776	ghi-r.1 for 107911877	ghi-r.1 for 107895333	cit-r.1 for 102611404	gma-u.5 for 100811704	gma-u.5 for 100794512	vvi-u.5 for 100247848	ppo-u.5 for 18105134	ppo-u.5 for 7453933	mtr-u.5 for 11432418	mtr-u.5 for 25498157	mtr-u.5 for 25481479	sly-u.5 for 101243998	sot-r.1 for 102593878	nta-r.1 for 107800746	nta-r.1 for 107824229	osa-u.5 for 4331288	zma-u.5 for 100278237	tae-r.2 for 123093929	tae-r.2 for 123099163	tae-r.2 for 123106125	hvu-r.1 for 123450006	sbi-r.1 for 8059540	bdi-r.1 for 112268585	cre-r.1 for CHLRE_03g165900v5

Ortholog

Ortholog ID: 2826

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized protein

phosphoglycerate mutase family protein

uncharacterized LOC103831373

uncharacterized LOC103862878

uncharacterized LOC103862880

uncharacterized LOC125576220

uncharacterized LOC106415395

uncharacterized LOC106412297

uncharacterized LOC107918776

uncharacterized LOC107911877

uncharacterized LOC107895333

hypothetical protein

uncharacterized LOC100794512

uncharacterized LOC100780830

uncharacterized LOC100247848

uncharacterized LOC18105134

uncharacterized LOC7453933

uncharacterized LOC11432418

uncharacterized LOC25498157

uncharacterized LOC25481479

Phosphoglycerate mutase family protein

uncharacterized LOC102593878

uncharacterized LOC107800746

uncharacterized LOC107824229

uncharacterized LOC4331288

uncharacterized LOC100278237

uncharacterized LOC123093929

uncharacterized LOC123099163

uncharacterized LOC123106125

uncharacterized LOC123450006

uncharacterized LOC8059540

uncharacterized LOC112268585

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	3
ghi00500	Starch and sucrose metabolism	2
ghi00561	Glycerolipid metabolism	2
ghi00564	Glycerophospholipid metabolism	2
ghi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	2
ghi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	4
gma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00020	Citrate cycle (TCA cycle)	2
vvi01200	Carbon metabolism	2
vvi01210	2-Oxocarboxylic acid metabolism	2
vvi01230	Biosynthesis of amino acids	2
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2
ppo04070	Phosphatidylinositol signaling system	2
ppo04075	Plant hormone signal transduction	2
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00541	Biosynthesis of various nucleotide sugars	5
ppo01250	Biosynthesis of nucleotide sugars	5
ppo04141	Protein processing in endoplasmic reticulum	4
ppo00190	Oxidative phosphorylation	2
ppo03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	3
mtr04016	MAPK signaling pathway - plant	2
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	3
sot04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	3
nta00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	3
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00062	Fatty acid elongation	2
tae01212	Fatty acid metabolism	2
tae04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	4

Expression

Expression pattern

Entrez Gene ID^*

28719924

28719419

103831373

103862878

103862880

125576220

106415395

106412297

107918776

107911877

107895333

102611404

100794512

100780830

100247848

18105134

7453933

11432418

25498157

25481479

101243998

102593878

107800746

107824229

4331288

100278237

123093929

123099163

123106125

123450006

8059540

112268585

5729030

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT3G60450 (ath-u.5 coexpression data)

Top 50 enrichment test to AT3G60450 (ath-u.5 coexpression data)


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	11	3	3	3	1	2	1	2	3	1	1	2	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT3G60450 (ath-u.5 coexpression data)

Top 50 enrichment test to AT3G60450 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**