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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AtATG18a   Transducin/WD40 repeat-like superfamily protein 
 ath-r.7   AtATG18a   Transducin/WD40 repeat-like superfamily protein 
 ath-m.9   AtATG18a   Transducin/WD40 repeat-like superfamily protein 
 ath-e.2   AtATG18a   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.bio   AtATG18a   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.hor   AtATG18a   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.lig   AtATG18a   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.str   AtATG18a   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.tis   AtATG18a   Transducin/WD40 repeat-like superfamily protein 
 bra-r.6   103842080   autophagy-related protein 18a 
 bra-r.6   103830367   autophagy-related protein 18a 
 bra-r.6   103862776   autophagy-related protein 18a 
 bna-r.1   106435246   autophagy-related protein 18a-like 
 bna-r.1   106420544   autophagy-related protein 18a 
 bna-r.1   106416199   autophagy-related protein 18a 
 ghi-r.1   121203132   autophagy-related protein 18a 
 ghi-r.1   107929963   autophagy-related protein 18a 
 ghi-r.1   121224608   autophagy-related protein 18a 
 cit-r.1   102608108   autophagy-related protein 18a-like 
 cit-r.1   102614453   autophagy-related protein 18a 
 gma-u.5   100781692   autophagy-related protein 18a 
 gma-u.5   100787427   autophagy-related protein 18a 
 gma-u.5   100800215   autophagy-related protein 18a 
 vvi-u.5   100251047   autophagy-related protein 18a 
 vvi-u.5   100264797   autophagy-related protein 18a 
 vvi-u.5   100259615   autophagy-related protein 18a 
 ppo-u.5   7457952   autophagy-related protein 18a 
 ppo-u.5   7473272   autophagy-related protein 18a 
 ppo-u.5   18096458   autophagy-related protein 18a 
 mtr-u.5   11416663   autophagy-related protein 18a 
 mtr-u.5   11431898   autophagy-related protein 18a 
 sly-u.5   101254414   autophagy-related protein 18a-like 
 sly-u.5   101248426   autophagy-related protein 18a 
 sot-r.1   102597713   autophagy-related protein 18a 
 sot-r.1   102587405   autophagy-related protein 18a-like 
 nta-r.1   107827150   autophagy-related protein 18a 
 nta-r.1   107814560   autophagy-related protein 18a 
 osa-u.5   4326829   autophagy-related protein 18a 
 zma-u.5   103636317   autophagy-related protein 18a-like 
 zma-u.5   100272812   WD repeat-containing protein domain phosphoinositide-interacting protein 3 
 tae-r.2   123072197   autophagy-related protein 18a 
 tae-r.2   123080452   autophagy-related protein 18a 
 tae-r.2   123063263   autophagy-related protein 18a 
 hvu-r.1   123445353   autophagy-related protein 18a 
 sbi-r.1   8063624   autophagy-related protein 18a 
 bdi-r.1   100831123   autophagy-related protein 18a 
 cre-r.1   CHLRE_10g425750v5   uncharacterized protein 

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Top 50 coexpressed genes to AtATG18a (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AtATG18a (ath-u.5 coexpression data)

CoexMap"825452"


athAtATG18a | Entrez gene ID : 825452      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 3 3 3 2 3 3 3 2 2 2 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010508 [list] [network] positive regulation of autophagy  (9 genes)  IMP  
GO:0006914 [list] [network] autophagy  (32 genes)  IMP  
GO:0010150 [list] [network] leaf senescence  (128 genes)  IMP  
GO:0042594 [list] [network] response to starvation  (246 genes)  IEP IMP  
GO:0050832 [list] [network] defense response to fungus  (282 genes)  IEP  
GO:0006979 [list] [network] response to oxidative stress  (384 genes)  IEP  
GO:0009414 [list] [network] response to water deprivation  (426 genes)  IEP IMP  
GO:0009651 [list] [network] response to salt stress  (473 genes)  IEP  
GO:0006970 [list] [network] response to osmotic stress  (578 genes)  IEP  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001030918.4 [sequence] [blastp]
NP_567132.4 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  vacu 2,  cyto_nucl 2,  chlo 1,  cyto 1,  E.R. 1,  cysk_nucl 1,  nucl_plas 1,  cyto_E.R. 1  (predict for NP_001030918.4)
nucl 3,  vacu 2,  cyto_nucl 2,  chlo 1,  cyto 1,  E.R. 1,  nucl_plas 1,  cyto_E.R. 1  (predict for NP_567132.4)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001030918.4)
chlo 8  (predict for NP_567132.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AtATG18a
ath-r.7
for
AtATG18a
ath-m.9
for
AtATG18a
ath-e.2
for
AtATG18a
ath-m.4.bio
for
AtATG18a
ath-m.4.hor
for
AtATG18a
ath-m.4.lig
for
AtATG18a
ath-m.4.str
for
AtATG18a
ath-m.4.tis
for
AtATG18a
bra-r.6
for
103842080
bra-r.6
for
103830367
bra-r.6
for
103862776
bna-r.1
for
106435246
bna-r.1
for
106420544
bna-r.1
for
106416199
ghi-r.1
for
121203132
ghi-r.1
for
107929963
ghi-r.1
for
121224608
cit-r.1
for
102608108
cit-r.1
for
102614453
gma-u.5
for
100781692
gma-u.5
for
100787427
gma-u.5
for
100800215
vvi-u.5
for
100251047
vvi-u.5
for
100264797
vvi-u.5
for
100259615
ppo-u.5
for
7457952
ppo-u.5
for
7473272
ppo-u.5
for
18096458
mtr-u.5
for
11416663
mtr-u.5
for
11431898
sly-u.5
for
101254414
sly-u.5
for
101248426
sot-r.1
for
102597713
sot-r.1
for
102587405
nta-r.1
for
107827150
nta-r.1
for
107814560
osa-u.5
for
4326829
zma-u.5
for
103636317
zma-u.5
for
100272812
tae-r.2
for
123072197
tae-r.2
for
123080452
tae-r.2
for
123063263
hvu-r.1
for
123445353
sbi-r.1
for
8063624
bdi-r.1
for
100831123
cre-r.1
for
CHLRE_10g425750v5


Ortholog ID: 3949
Species ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr sly sly sot sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol AtATG18a LOC103842080 LOC103830367 LOC103862776 LOC106420544 LOC106416199 LOC106376362 LOC107929963 LOC121224608 LOC107923991 LOC102608108 LOC102614453 LOC100781692 LOC100800215 LOC100807695 LOC100251047 LOC100264797 LOC100259615 LOC7457952 LOC7473272 LOC18096458 LOC11416663 LOC11431898 LOC101254414 LOC101248426 LOC102597713 LOC102587405 LOC107827150 LOC107814560 LOC4326829 LOC103636317 LOC100272812 LOC123072197 LOC123080452 LOC123063263 LOC123445353 LOC8063624 LOC100831123 CHLRE_10g425750v5
Function* Transducin/WD40 repeat-like superfamily protein autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a-like autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a-like autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a-like autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a-like WD repeat-containing protein domain phosphoinositide-interacting protein 3 autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a autophagy-related protein 18a uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
bra00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 4
ppo00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04136 Autophagy - other 2
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04136 Autophagy - other 2
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
tae03272 Virion - Hepatitis viruses 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
tae03272 Virion - Hepatitis viruses 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03250 Viral life cycle - HIV-1 3
tae03272 Virion - Hepatitis viruses 3
tae04144 Endocytosis 3
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 6
sbi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825452 103842080 103830367 103862776 106420544 106416199 106376362 107929963 121224608 107923991 102608108 102614453 100781692 100800215 100807695 100251047 100264797 100259615 7457952 7473272 18096458 11416663 11431898 101254414 101248426 102597713 102587405 107827150 107814560 4326829 103636317 100272812 123072197 123080452 123063263 123445353 8063624 100831123 66054971
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