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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G62970   zinc finger (C3HC4-type RING finger) family protein 
 ath-r.7   AT3G62970   zinc finger (C3HC4-type RING finger) family protein 
 ath-m.9   AT3G62970   zinc finger (C3HC4-type RING finger) family protein 
 ath-e.2   AT3G62970   zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.bio   AT3G62970   zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.hor   AT3G62970   zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.lig   AT3G62970   zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.str   AT3G62970   zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.tis   AT3G62970   zinc finger (C3HC4-type RING finger) family protein 
 ath-u.5   AT5G18650   CHY-type/CTCHY-type/RING-type Zinc finger protein 
 gma-u.5   100792038   RING finger and CHY zinc finger domain-containing protein 1-like 
 gma-u.5   100781566   E3 ubiquitin-protein ligase MIEL1 
 gma-u.5   100812839   RING finger and CHY zinc finger domain-containing protein 1-like 
 vvi-u.5   100264899   E3 ubiquitin-protein ligase MIEL1 
 vvi-u.5   100261415   E3 ubiquitin-protein ligase MIEL1 
 ppo-u.5   7481643   E3 ubiquitin-protein ligase MIEL1 
 ppo-u.5   7491321   E3 ubiquitin-protein ligase MIEL1 
 mtr-u.5   11446119   E3 ubiquitin-protein ligase MIEL1 
 sly-u.5   101246466   E3 ubiquitin-protein ligase MIEL1 
 sly-u.5   101247534   E3 ubiquitin-protein ligase MIEL1 
 sly-u.5   101266831   E3 ubiquitin-protein ligase MIEL1 
 osa-u.5   4352424   E3 ubiquitin-protein ligase MIEL1 
 osa-u.5   4332833   E3 ubiquitin-protein ligase SRFP1-like 
 zma-u.5   100282790   RING finger and CHY zinc finger domain-containing protein 1 

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Top 50 coexpressed genes to AT3G62970 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G62970 (ath-u.5 coexpression data)

CoexMap"825472"


athAT3G62970 | Entrez gene ID : 825472      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 10 3 2 2 1 3 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (162 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001325834.1 [sequence] [blastp]
NP_001325835.1 [sequence] [blastp]
NP_191856.4 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 2,  extr 2,  cysk_nucl 2  (predict for NP_001325834.1)
nucl 4,  cyto 2,  extr 2,  nucl_plas 2  (predict for NP_001325835.1)
nucl 4,  cyto 2,  extr 2,  cysk_nucl 2  (predict for NP_191856.4)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for NP_001325834.1)
other 6,  chlo 3  (predict for NP_001325835.1)
other 6,  chlo 3  (predict for NP_191856.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G62970

.
ath-r.7
for
AT3G62970

.
ath-m.9
for
AT3G62970

.
ath-e.2
for
AT3G62970

.
ath-m.4.bio
for
AT3G62970

.
ath-m.4.hor
for
AT3G62970

.
ath-m.4.lig
for
AT3G62970

.
ath-m.4.str
for
AT3G62970

.
ath-m.4.tis
for
AT3G62970

.
ath-u.5
for
AT5G18650

.
gma-u.5
for
100792038

.
gma-u.5
for
100781566

.
gma-u.5
for
100812839

.
vvi-u.5
for
100264899

.
vvi-u.5
for
100261415

.
ppo-u.5
for
7481643

.
ppo-u.5
for
7491321

.
mtr-u.5
for
11446119

.
sly-u.5
for
101246466

.
sly-u.5
for
101247534

.
sly-u.5
for
101266831

.
osa-u.5
for
4352424

.
osa-u.5
for
4332833

.
zma-u.5
for
100282790

.


Ortholog ID: 2658
Species ath ath gma gma sly sly osa osa zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi bdi nta nta
Symbol AT3G62970 AT5G18650 LOC100812839 LOC100812246 LOC101246466 LOC101247534 LOC4332833 LOC4352424 LOC100282790 LOC103249165 LOC103845815 LOC100261415 LOC100264899 LOC7481643 LOC7491321 LOC11446119 LOC123091020 LOC123086957 LOC123396647 LOC107893804 LOC107913261 LOC106375235 LOC106371919 CHLRE_17g718300v5 LOC8066297 LOC102600991 LOC102579560 LOC102629227 LOC100828315 LOC100836585 LOC107806262 LOC107806785
Function* zinc finger (C3HC4-type RING finger) family protein CHY-type/CTCHY-type/RING-type Zinc finger protein RING finger and CHY zinc finger domain-containing protein 1-like E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase SRFP1-like E3 ubiquitin-protein ligase MIEL1 RING finger and CHY zinc finger domain-containing protein 1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase SRFP1 E3 ubiquitin-protein ligase SRFP1 E3 ubiquitin-protein ligase MIEL1-like E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 uncharacterized protein E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase MIEL1 E3 ubiquitin-protein ligase SRFP1 E3 ubiquitin-protein ligase MIEL1-like E3 ubiquitin-protein ligase MIEL1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath00561 Glycerolipid metabolism 2
ath00270 Cysteine and methionine metabolism 2
ath00670 One carbon pool by folate 2
ath00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma00480 Glutathione metabolism 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00650 Butanoate metabolism 2
osa01200 Carbon metabolism 2
osa00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma04148 Efferocytosis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00592 alpha-Linolenic acid metabolism 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
bna00280 Valine, leucine and isoleucine degradation 4
bna00650 Butanoate metabolism 4
bna04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 2
bdi03420 Nucleotide excision repair 2
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 6
nta00100 Steroid biosynthesis 3
nta00561 Glycerolipid metabolism 3
nta00564 Glycerophospholipid metabolism 3
nta00565 Ether lipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825472 831983 100812839 100812246 101246466 101247534 4332833 4352424 100282790 103249165 103845815 100261415 100264899 7481643 7491321 11446119 123091020 123086957 123396647 107893804 107913261 106375235 106371919 5729325 8066297 102600991 102579560 102629227 100828315 100836585 107806262 107806785
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