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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   FKD1   FORKED 1 
 ath-r.7   FKD1   FORKED 1 
 ath-m.9   FKD1   FORKED 1 
 ath-e.2   FKD1   FORKED 1 
 ath-m.4.bio   FKD1   FORKED 1 
 ath-m.4.hor   FKD1   FORKED 1 
 ath-m.4.lig   FKD1   FORKED 1 
 ath-m.4.str   FKD1   FORKED 1 
 ath-m.4.tis   FKD1   FORKED 1 
 ath-u.5   AT3G22810   auxin canalization protein (DUF828) 
 ath-u.5   AT4G14740   auxin canalization protein (DUF828) 
 ath-u.5   AT5G43870   auxin canalization protein (DUF828) 
 gma-u.5   100815538   VAN3-binding protein 
 gma-u.5   100814874   VAN3-binding protein 
 gma-u.5   100782024   VAN3-binding protein 
 vvi-u.5   100256307   VAN3-binding protein 
 vvi-u.5   100854030   VAN3-binding protein 
 ppo-u.5   7498060   VAN3-binding protein 
 ppo-u.5   7467503   VAN3-binding protein 
 mtr-u.5   25482955   VAN3-binding protein 
 mtr-u.5   11425610   VAN3-binding protein 
 sly-u.5   101264972   VAN3-binding protein 
 sly-u.5   101254530   VAN3-binding protein 
 osa-u.5   4333519   VAN3-binding protein 
 osa-u.5   4352732   VAN3-binding protein 
 zma-u.5   103639593   VAN3-binding protein 
 zma-u.5   100278869   uncharacterized LOC100278869 
 zma-u.5   100383305   VAN3-binding protein 

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Top 50 coexpressed genes to FKD1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to FKD1 (ath-u.5 coexpression data)

CoexMap"825505"


athFKD1 | Entrez gene ID : 825505      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 12 3 2 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006892 [list] [network] post-Golgi vesicle-mediated transport  (20 genes)  IDA  
GO:0010305 [list] [network] leaf vascular tissue pattern formation  (29 genes)  IMP  
GO:0009734 [list] [network] auxin-activated signaling pathway  (65 genes)  IMP  
GO:0010087 [list] [network] phloem or xylem histogenesis  (125 genes)  IMP  
GO:0009733 [list] [network] response to auxin  (344 genes)  IEP  
GO:0007165 [list] [network] signal transduction  (1102 genes)  ISS  
GO CC
GO:0005802 [list] [network] trans-Golgi network  (279 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0035091 [list] [network] phosphatidylinositol binding  (93 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001319826.1 [sequence] [blastp]
NP_191889.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 1,  mito 1,  vacu 1,  pero 1  (predict for NP_001319826.1)
nucl 7,  cyto 1,  mito 1,  E.R. 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_191889.2)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for NP_001319826.1)
chlo 6,  mito 3  (predict for NP_191889.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
FKD1

.
ath-r.7
for
FKD1

.
ath-m.9
for
FKD1

.
ath-e.2
for
FKD1

.
ath-m.4.bio
for
FKD1

.
ath-m.4.hor
for
FKD1

.
ath-m.4.lig
for
FKD1

.
ath-m.4.str
for
FKD1

.
ath-m.4.tis
for
FKD1

.
ath-u.5
for
AT3G22810

.
ath-u.5
for
AT4G14740

.
ath-u.5
for
AT5G43870

.
gma-u.5
for
100815538

.
gma-u.5
for
100814874

.
gma-u.5
for
100782024

.
vvi-u.5
for
100256307

.
vvi-u.5
for
100854030

.
ppo-u.5
for
7498060

.
ppo-u.5
for
7467503

.
mtr-u.5
for
25482955

.
mtr-u.5
for
11425610

.
sly-u.5
for
101264972

.
sly-u.5
for
101254530

.
osa-u.5
for
4333519

.
osa-u.5
for
4352732

.
zma-u.5
for
103639593

.
zma-u.5
for
100278869

.
zma-u.5
for
100383305

.


Ortholog ID: 1745
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT3G22810 AT5G43870 LOC100814874 LOC100793882 LOC101264972 LOC101254530 LOC4333519 LOC4352732 LOC103639593 LOC100383305 LOC103871780 LOC103833465 LOC100854030 LOC100256307 LOC7498060 LOC11425610 LOC123113240 LOC123110449 LOC123396363 LOC123452139 LOC107931397 LOC107930679 LOC106412041 LOC106347034 LOC8062238 LOC8076658 LOC102598173 LOC102600556 LOC102623744 LOC102621060 LOC100828163 LOC100833525 LOC107774238 LOC107781740
Function* auxin canalization protein (DUF828) auxin canalization protein (DUF828) VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein-like VAN3-binding protein-like VAN3-binding protein VAN3-binding protein VAN3-binding protein-like VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein-like VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein VAN3-binding protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00073 Cutin, suberine and wax biosynthesis 2
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
ghi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
ghi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 6
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 6
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821852 834409 100814874 100793882 101264972 101254530 4333519 4352732 103639593 100383305 103871780 103833465 100854030 100256307 7498060 11425610 123113240 123110449 123396363 123452139 107931397 107930679 106412041 106347034 8062238 8076658 102598173 102600556 102623744 102621060 100828163 100833525 107774238 107781740
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