Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G13590   Uncharacterized protein family (UPF0016) 
 ath-r.7   AT4G13590   Uncharacterized protein family (UPF0016) 
 ath-e.2   AT4G13590   Uncharacterized protein family (UPF0016) 
 bra-r.6   103833370   protein PAM71-homolog, chloroplastic 
 bna-r.1   106415164   protein PAM71-homolog, chloroplastic 
 bna-r.1   106433147   protein PAM71-homolog, chloroplastic 
 ghi-r.1   107927772   protein PAM71-homolog, chloroplastic 
 ghi-r.1   107957054   protein PAM71-homolog, chloroplastic 
 cit-r.1   102616459   protein PAM71-homolog, chloroplastic 
 gma-u.5   100785052   putative Ca2+/H+ antiporter 
 vvi-u.5   100256177   protein PAM71-homolog, chloroplastic 
 ppo-u.5   7481240   protein PAM71-homolog, chloroplastic 
 ppo-u.5   7460531   protein PAM71-homolog, chloroplastic-like 
 mtr-u.5   25483076   protein PAM71-homolog, chloroplastic 
 sly-u.5   101251818   protein PAM71-homolog, chloroplastic 
 sot-r.1   102592395   GDT1-like protein 2, chloroplastic 
 nta-r.1   107781467   protein PAM71-homolog, chloroplastic-like 
 nta-r.1   107769454   protein PAM71-homolog, chloroplastic 
 osa-u.5   4350683   GDT1-like protein 2, chloroplastic 
 zma-u.5   100273159   GDT1-like protein 2 chloroplastic 
 tae-r.2   123043448   GDT1-like protein 2, chloroplastic 
 tae-r.2   123051315   GDT1-like protein 2, chloroplastic 
 tae-r.2   123187269   GDT1-like protein 2, chloroplastic 
 hvu-r.1   123424484   GDT1-like protein 2, chloroplastic 
 sbi-r.1   110436658   GDT1-like protein 2, chloroplastic 
 bdi-r.1   100823171   GDT1-like protein 2, chloroplastic 
 bdi-r.1   100843841   GDT1-like protein 2, chloroplastic 
 cre-r.1   CHLRE_16g660000v5   uncharacterized protein 
 cre-r.1   CHLRE_16g660050v5   uncharacterized protein 

close


Top 50 coexpressed genes to AT4G13590 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT4G13590 (ath-u.5 coexpression data)

CoexMap"826992"


athAT4G13590 | Entrez gene ID : 826992      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 2 1 1 1 2 1 1 1 2 1 1 3 1 1 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071421 [list] [network] manganese ion transmembrane transport  (4 genes)  IGI  
GO:0070588 [list] [network] calcium ion transmembrane transport  (22 genes)  IGI  
GO:0019722 [list] [network] calcium-mediated signaling  (83 genes)  IEP  
GO CC
GO:0009706 [list] [network] chloroplast inner membrane  (66 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
GO:0005384 [list] [network] manganese ion transmembrane transporter activity  (14 genes)  IGI  
GO:0015085 [list] [network] calcium ion transmembrane transporter activity  (65 genes)  IGI  
Protein NP_001190718.1 [sequence] [blastp]
NP_193095.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_001190718.1)
chlo 10  (predict for NP_193095.2)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001190718.1)
chlo 7  (predict for NP_193095.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G13590
ath-r.7
for
AT4G13590
ath-e.2
for
AT4G13590
bra-r.6
for
103833370
bna-r.1
for
106415164
bna-r.1
for
106433147
ghi-r.1
for
107927772
ghi-r.1
for
107957054
cit-r.1
for
102616459
gma-u.5
for
100785052
vvi-u.5
for
100256177
ppo-u.5
for
7481240
ppo-u.5
for
7460531
mtr-u.5
for
25483076
sly-u.5
for
101251818
sot-r.1
for
102592395
nta-r.1
for
107781467
nta-r.1
for
107769454
osa-u.5
for
4350683
zma-u.5
for
100273159
tae-r.2
for
123043448
tae-r.2
for
123051315
tae-r.2
for
123187269
hvu-r.1
for
123424484
sbi-r.1
for
110436658
bdi-r.1
for
100823171
bdi-r.1
for
100843841
cre-r.1
for
CHLRE_16g660000v5
cre-r.1
for
CHLRE_16g660050v5


Ortholog ID: 9013
Species ath bra bna bna ghi ghi cit gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi bdi cre cre
Symbol AT4G13590 LOC103833370 LOC106415164 LOC106433147 LOC107927772 LOC107957054 LOC102616459 LOC100785052 LOC100256177 LOC7481240 LOC7460531 LOC25483076 LOC101251818 LOC102592395 LOC107781467 LOC107769454 LOC4350683 LOC100273159 LOC123043448 LOC123051315 LOC123187269 LOC123424484 LOC110436658 LOC100823171 LOC100843841 CHLRE_16g660000v5 CHLRE_16g660050v5
Function* Uncharacterized protein family (UPF0016) protein PAM71-homolog, chloroplastic protein PAM71-homolog, chloroplastic protein PAM71-homolog, chloroplastic protein PAM71-homolog, chloroplastic protein PAM71-homolog, chloroplastic protein PAM71-homolog, chloroplastic putative Ca2+/H+ antiporter protein PAM71-homolog, chloroplastic protein PAM71-homolog, chloroplastic protein PAM71-homolog, chloroplastic-like protein PAM71-homolog, chloroplastic protein PAM71-homolog, chloroplastic GDT1-like protein 2, chloroplastic protein PAM71-homolog, chloroplastic-like protein PAM71-homolog, chloroplastic GDT1-like protein 2, chloroplastic GDT1-like protein 2 chloroplastic GDT1-like protein 2, chloroplastic GDT1-like protein 2, chloroplastic GDT1-like protein 2, chloroplastic GDT1-like protein 2, chloroplastic GDT1-like protein 2, chloroplastic GDT1-like protein 2, chloroplastic GDT1-like protein 2, chloroplastic uncharacterized protein uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00270 Cysteine and methionine metabolism 2
ghi00330 Arginine and proline metabolism 2
ghi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma03018 RNA degradation 3
gma03040 Spliceosome 2
gma04144 Endocytosis 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00860 Porphyrin metabolism 4
nta01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00906 Carotenoid biosynthesis 3
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00220 Arginine biosynthesis 4
cre01230 Biosynthesis of amino acids 4
cre00860 Porphyrin metabolism 4
cre01210 2-Oxocarboxylic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826992 103833370 106415164 106433147 107927772 107957054 102616459 100785052 100256177 7481240 7460531 25483076 101251818 102592395 107781467 107769454 4350683 100273159 123043448 123051315 123187269 123424484 110436658 100823171 100843841 5723418 5723419
The preparation time of this page was 1.5 [sec].