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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G02760   RNI-like superfamily protein 
 ath-r.7   AT4G02760   RNI-like superfamily protein 
 ath-e.2   AT4G02760   RNI-like superfamily protein 
 ath-u.5   AT4G02740   F-box/RNI-like superfamily protein 
 bra-r.6   103836716   F-box protein At4g02760 
 bra-r.6   103858742   F-box protein SKIP17 
 bna-r.1   111204484   F-box protein SKIP17 
 bna-r.1   106443782   F-box protein SKIP17-like 
 ghi-r.1   107910950   F-box protein SKIP17 
 ghi-r.1   107924329   F-box protein At4g02760 
 ghi-r.1   107945012   F-box protein SKIP17 
 cit-r.1   102611208   F-box protein SKIP17-like 
 gma-u.5   100786317   F-box protein At4g02760 
 gma-u.5   100306182   F-box/LRR-repeat protein 
 vvi-u.5   100254453   F-box protein SKIP17 
 ppo-u.5   7480035   F-box protein SKIP17 
 ppo-u.5   7464680   F-box protein SKIP17 
 mtr-u.5   25499126   F-box protein At4g02760 
 mtr-u.5   25493504   F-box protein At4g02760 
 nta-r.1   107832421   F-box protein At4g02760 
 nta-r.1   107762854   F-box protein At4g02760 

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Top 50 coexpressed genes to AT4G02760 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G02760 (ath-u.5 coexpression data)

CoexMap"828184"


athAT4G02760 | Entrez gene ID : 828184      
Species ath bra bna ghi cit gma vvi ppo mtr nta cre zma sbi bdi tae osa hvu sly sot
Paralog 4 2 2 3 1 2 1 2 2 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001078348.4 [sequence] [blastp]
NP_001190662.1 [sequence] [blastp]
NP_001319852.1 [sequence] [blastp]
NP_001319853.1 [sequence] [blastp]
NP_001329695.1 [sequence] [blastp]
NP_001329696.1 [sequence] [blastp]
NP_001329697.1 [sequence] [blastp]
NP_001329698.1 [sequence] [blastp]
NP_001329699.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for NP_001078348.4)
nucl 4,  chlo 4,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for NP_001190662.1)
nucl 4,  chlo 4,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for NP_001319852.1)
nucl 4,  chlo 4,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for NP_001319853.1)
nucl 4,  chlo 4,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for NP_001329695.1)
nucl 4,  chlo 4,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for NP_001329696.1)
nucl 4,  chlo 4,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for NP_001329697.1)
nucl 4,  chlo 4,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for NP_001329698.1)
nucl 4,  chlo 4,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for NP_001329699.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001078348.4)
other 7  (predict for NP_001190662.1)
other 7  (predict for NP_001319852.1)
other 7  (predict for NP_001319853.1)
other 7  (predict for NP_001329695.1)
other 7  (predict for NP_001329696.1)
other 7  (predict for NP_001329697.1)
other 7  (predict for NP_001329698.1)
other 7  (predict for NP_001329699.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G02760
ath-r.7
for
AT4G02760
ath-e.2
for
AT4G02760
ath-u.5
for
AT4G02740
bra-r.6
for
103836716
bra-r.6
for
103858742
bna-r.1
for
111204484
bna-r.1
for
106443782
ghi-r.1
for
107910950
ghi-r.1
for
107924329
ghi-r.1
for
107945012
cit-r.1
for
102611208
gma-u.5
for
100786317
gma-u.5
for
100306182
vvi-u.5
for
100254453
ppo-u.5
for
7480035
ppo-u.5
for
7464680
mtr-u.5
for
25499126
mtr-u.5
for
25493504
nta-r.1
for
107832421
nta-r.1
for
107762854


Ortholog ID: 6616
Species ath ath bra bra bra bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr mtr nta nta
Symbol AT4G02760 AT4G02740 LOC103836716 LOC103858742 LOC103836717 LOC106443782 LOC106438710 LOC107910950 LOC107924329 LOC107945012 LOC102611208 LOC100786317 LOC100306182 LOC100254453 LOC7480035 LOC7464680 LOC25499126 LOC25493504 LOC107832421 LOC107762854
Function* RNI-like superfamily protein F-box/RNI-like superfamily protein F-box protein At4g02760 F-box protein SKIP17 F-box protein SKIP17 F-box protein SKIP17-like F-box protein SKIP17-like F-box protein SKIP17 F-box protein At4g02760 F-box protein SKIP17 F-box protein SKIP17-like F-box protein At4g02760 F-box/LRR-repeat protein F-box protein SKIP17 F-box protein SKIP17 F-box protein SKIP17 F-box protein At4g02760 F-box protein At4g02760 F-box protein At4g02760 F-box protein At4g02760
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00030 Pentose phosphate pathway 2
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 2
ppo01230 Biosynthesis of amino acids 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 4
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr00562 Inositol phosphate metabolism 2
mtr04070 Phosphatidylinositol signaling system 2
mtr04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828184 828188 103836716 103858742 103836717 106443782 106438710 107910950 107924329 107945012 102611208 100786317 100306182 100254453 7480035 7464680 25499126 25493504 107832421 107762854
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