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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   NdhS   NAD(P)H-quinone oxidoreductase subunit S 
 ath-r.7   NdhS   NAD(P)H-quinone oxidoreductase subunit S 
 ath-m.9   NdhS   NAD(P)H-quinone oxidoreductase subunit S 
 ath-e.2   NdhS   NAD(P)H-quinone oxidoreductase subunit S 
 ath-m.4.bio   NdhS   NAD(P)H-quinone oxidoreductase subunit S 
 ath-m.4.hor   NdhS   NAD(P)H-quinone oxidoreductase subunit S 
 ath-m.4.lig   NdhS   NAD(P)H-quinone oxidoreductase subunit S 
 ath-m.4.str   NdhS   NAD(P)H-quinone oxidoreductase subunit S 
 ath-m.4.tis   NdhS   NAD(P)H-quinone oxidoreductase subunit S 
 bra-r.6   103861444   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 bra-r.6   103861507   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 bna-r.1   106406899   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 bna-r.1   106415659   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic-like 
 bna-r.1   106438443   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 ghi-r.1   107955147   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 ghi-r.1   107957127   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 cit-r.1   102609294   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 gma-u.5   100776479   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 gma-u.5   100527171   uncharacterized LOC100527171 
 gma-u.5   100527145   uncharacterized LOC100527145 
 vvi-u.5   100253040   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 ppo-u.5   7467088   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 ppo-u.5   7497847   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 mtr-u.5   11432224   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 mtr-u.5   11445197   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 sly-u.5   101255121   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 sot-r.1   102584581   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 nta-r.1   107832469   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic-like 
 nta-r.1   107811723   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic-like 
 osa-u.5   4342649   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 zma-u.5   100276340   NAD(P)H-quinone oxidoreductase subunit S chloroplastic 
 tae-r.2   123191751   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 tae-r.2   123180568   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 tae-r.2   123113566   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 hvu-r.1   123399387   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic-like 
 hvu-r.1   123396839   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic-like 
 sbi-r.1   8055369   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 
 bdi-r.1   100844387   NAD(P)H-quinone oxidoreductase subunit S, chloroplastic 

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Top 50 coexpressed genes to NdhS (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to NdhS (ath-u.5 coexpression data)

CoexMap"828489"


athNdhS | Entrez gene ID : 828489      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 3 1 2 2 1 1 2 1 1 3 2 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009767 [list] [network] photosynthetic electron transport chain  (35 genes)  IMP  
GO CC
GO:0010598 [list] [network] NAD(P)H dehydrogenase complex (plastoquinone)  (13 genes)  IMP  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  HDA IMP  
GO:0009534 [list] [network] chloroplast thylakoid  (417 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
Protein NP_194120.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for NP_194120.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_194120.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
NdhS
ath-r.7
for
NdhS
ath-m.9
for
NdhS
ath-e.2
for
NdhS
ath-m.4.bio
for
NdhS
ath-m.4.hor
for
NdhS
ath-m.4.lig
for
NdhS
ath-m.4.str
for
NdhS
ath-m.4.tis
for
NdhS
bra-r.6
for
103861444
bra-r.6
for
103861507
bna-r.1
for
106406899
bna-r.1
for
106415659
bna-r.1
for
106438443
ghi-r.1
for
107955147
ghi-r.1
for
107957127
cit-r.1
for
102609294
gma-u.5
for
100776479
gma-u.5
for
100527171
gma-u.5
for
100527145
vvi-u.5
for
100253040
ppo-u.5
for
7467088
ppo-u.5
for
7497847
mtr-u.5
for
11432224
mtr-u.5
for
11445197
sly-u.5
for
101255121
sot-r.1
for
102584581
nta-r.1
for
107832469
nta-r.1
for
107811723
osa-u.5
for
4342649
zma-u.5
for
100276340
tae-r.2
for
123191751
tae-r.2
for
123180568
tae-r.2
for
123113566
hvu-r.1
for
123399387
hvu-r.1
for
123396839
sbi-r.1
for
8055369
bdi-r.1
for
100844387


Ortholog ID: 6050
Species ath bra bra bna bna bna ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol NdhS LOC103861444 LOC103861507 LOC106415659 LOC106438443 LOC106441520 LOC107955147 LOC107957127 LOC102609294 LOC100776479 LOC100527171 LOC100527145 LOC100253040 LOC7467088 LOC7497847 LOC11432224 LOC11445197 LOC101255121 LOC102584581 LOC107832469 LOC107811723 LOC4342649 LOC100276340 LOC123191751 LOC123180568 LOC123113566 LOC123407657 LOC8055369 LOC100844387
Function* NAD(P)H-quinone oxidoreductase subunit S NAD(P)H-quinone oxidoreductase subunit S, chloroplastic NAD(P)H-quinone oxidoreductase subunit S, chloroplastic NAD(P)H-quinone oxidoreductase subunit S, chloroplastic-like NAD(P)H-quinone oxidoreductase subunit S, chloroplastic NAD(P)H-quinone oxidoreductase subunit S, chloroplastic-like NAD(P)H-quinone oxidoreductase subunit S, chloroplastic NAD(P)H-quinone oxidoreductase subunit S, chloroplastic NAD(P)H-quinone oxidoreductase subunit S, chloroplastic NAD(P)H-quinone oxidoreductase subunit S, chloroplastic uncharacterized LOC100527171 uncharacterized LOC100527145 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic NAD(P)H-quinone oxidoreductase subunit S, chloroplastic NAD(P)H-quinone oxidoreductase subunit S, chloroplastic NAD(P)H-quinone oxidoreductase subunit S, chloroplastic NAD(P)H-quinone oxidoreductase subunit S, chloroplastic NAD(P)H-quinone oxidoreductase subunit S, chloroplastic NAD(P)H-quinone oxidoreductase subunit S, chloroplastic NAD(P)H-quinone oxidoreductase subunit S, chloroplastic-like NAD(P)H-quinone oxidoreductase subunit S, chloroplastic-like NAD(P)H-quinone oxidoreductase subunit S, chloroplastic NAD(P)H-quinone oxidoreductase subunit S chloroplastic NAD(P)H-quinone oxidoreductase subunit S, chloroplastic NAD(P)H-quinone oxidoreductase subunit S, chloroplastic NAD(P)H-quinone oxidoreductase subunit S, chloroplastic NAD(P)H-quinone oxidoreductase subunit S, chloroplastic-like NAD(P)H-quinone oxidoreductase subunit S, chloroplastic NAD(P)H-quinone oxidoreductase subunit S, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 10
ath00630 Glyoxylate and dicarboxylate metabolism 6
ath00710 Carbon fixation by Calvin cycle 5
ath00260 Glycine, serine and threonine metabolism 3
ath04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra00195 Photosynthesis 2
bra00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 8
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 5
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 8
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 5
cit00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 7
gma01200 Carbon metabolism 7
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 5
vvi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 2
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 6
mtr00710 Carbon fixation by Calvin cycle 4
mtr00010 Glycolysis / Gluconeogenesis 3
mtr00030 Pentose phosphate pathway 3
mtr00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 3
sly00710 Carbon fixation by Calvin cycle 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 8
sot00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 6
nta00710 Carbon fixation by Calvin cycle 5
nta01200 Carbon metabolism 5
nta00010 Glycolysis / Gluconeogenesis 3
nta00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00062 Fatty acid elongation 2
nta01040 Biosynthesis of unsaturated fatty acids 2
nta01212 Fatty acid metabolism 2
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 5
osa00190 Oxidative phosphorylation 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 2
zma00195 Photosynthesis 2
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 5
bdi01200 Carbon metabolism 4
bdi00710 Carbon fixation by Calvin cycle 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828489 103861444 103861507 106415659 106438443 106441520 107955147 107957127 102609294 100776479 100527171 100527145 100253040 7467088 7497847 11432224 11445197 101255121 102584581 107832469 107811723 4342649 100276340 123191751 123180568 123113566 123407657 8055369 100844387
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