ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	AT4G25170	Uncharacterized conserved protein (UCP012943)
ath-r.7	AT4G25170	Uncharacterized conserved protein (UCP012943)
ath-m.9	AT4G25170	Uncharacterized conserved protein (UCP012943)
ath-e.2	AT4G25170	Uncharacterized conserved protein (UCP012943)
ath-m.4.bio	AT4G25170	Uncharacterized conserved protein (UCP012943)
ath-m.4.hor	AT4G25170	Uncharacterized conserved protein (UCP012943)
ath-m.4.lig	AT4G25170	Uncharacterized conserved protein (UCP012943)
ath-m.4.str	AT4G25170	Uncharacterized conserved protein (UCP012943)
ath-m.4.tis	AT4G25170	Uncharacterized conserved protein (UCP012943)
bra-r.6	103862954	uncharacterized LOC103862954
bra-r.6	103834886	uncharacterized LOC103834886
bna-r.1	106401796	uncharacterized LOC106401796
bna-r.1	106346569	uncharacterized LOC106346569
ghi-r.1	107912051	uncharacterized LOC107912051
ghi-r.1	107911881	uncharacterized LOC107911881
cit-r.1	102614279	uncharacterized LOC102614279
cit-r.1	102614595	uncharacterized LOC102614595
cit-r.1	102615917	uncharacterized LOC102615917
gma-u.5	100795590	uncharacterized LOC100795590
vvi-u.5	100254691	uncharacterized LOC100254691
vvi-u.5	100243899	uncharacterized LOC100243899
ppo-u.5	7465497	uncharacterized LOC7465497
ppo-u.5	18105156	uncharacterized LOC18105156
mtr-u.5	25491882	uncharacterized LOC25491882
mtr-u.5	11442409	uncharacterized LOC11442409
sly-u.5	101265167	uncharacterized LOC101265167
sly-u.5	101263682	uncharacterized LOC101263682
sot-r.1	102592161	uncharacterized LOC102592161
sot-r.1	102586936	uncharacterized LOC102586936
nta-r.1	107785241	uncharacterized LOC107785241
nta-r.1	107778812	uncharacterized LOC107778812
nta-r.1	107768939	uncharacterized LOC107768939
osa-u.5	4336592	uncharacterized LOC4336592
osa-u.5	4330206	uncharacterized LOC4330206
zma-u.5	103653870	uncharacterized LOC103653870
zma-u.5	100276928	Uncharacterized conserved protein (UCP012943)
tae-r.2	123137684	uncharacterized LOC123137684
tae-r.2	123127946	uncharacterized LOC123127946
tae-r.2	123046403	uncharacterized LOC123046403
hvu-r.1	123402446	uncharacterized LOC123402446
hvu-r.1	123427569	uncharacterized LOC123427569
sbi-r.1	8076235	uncharacterized LOC8076235
bdi-r.1	100834760	uncharacterized LOC100834760
bdi-r.1	100822545	uncharacterized LOC100822545

Top 50 coexpressed genes to AT4G25170 (ath-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT4G25170 (ath-u.5 coexpression data)

CoexMap"828620"

[Cytoscape]

Annotation

functional annotation

Function

Uncharacterized conserved protein (UCP012943)

KEGG

GO BP

GO CC

GO MF

Protein

NP_001154267.1 [sequence] [blastp]
NP_567716.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, mito 1, extr 1, vacu 1	(predict for NP_001154267.1)
chlo 7, vacu 1, E.R._vacu 1, mito 1, extr 1	(predict for NP_567716.1)

Subcellular
localization
TargetP

mito 5	(predict for NP_001154267.1)
mito 5	(predict for NP_567716.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT4G25170	ath-r.7 for AT4G25170	ath-m.9 for AT4G25170	ath-e.2 for AT4G25170	ath-m.4.bio for AT4G25170	ath-m.4.hor for AT4G25170	ath-m.4.lig for AT4G25170	ath-m.4.str for AT4G25170	ath-m.4.tis for AT4G25170	bra-r.6 for 103862954	bra-r.6 for 103834886	bna-r.1 for 106401796	bna-r.1 for 106346569	ghi-r.1 for 107912051	ghi-r.1 for 107911881	cit-r.1 for 102614279	cit-r.1 for 102614595	cit-r.1 for 102615917	gma-u.5 for 100795590	vvi-u.5 for 100254691	vvi-u.5 for 100243899	ppo-u.5 for 7465497	ppo-u.5 for 18105156	mtr-u.5 for 25491882	mtr-u.5 for 11442409	sly-u.5 for 101265167	sly-u.5 for 101263682	sot-r.1 for 102592161	sot-r.1 for 102586936	nta-r.1 for 107785241	nta-r.1 for 107778812	nta-r.1 for 107768939	osa-u.5 for 4336592	osa-u.5 for 4330206	zma-u.5 for 103653870	zma-u.5 for 100276928	tae-r.2 for 123137684	tae-r.2 for 123127946	tae-r.2 for 123046403	hvu-r.1 for 123402446	hvu-r.1 for 123427569	sbi-r.1 for 8076235	bdi-r.1 for 100834760	bdi-r.1 for 100822545

Ortholog

Ortholog ID: 3031

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

Uncharacterized conserved protein (UCP012943)

uncharacterized LOC103862954

uncharacterized LOC103834886

uncharacterized LOC106401796

uncharacterized LOC106346569

uncharacterized LOC106426423

uncharacterized LOC107912051

uncharacterized LOC107923123

uncharacterized LOC102614279

uncharacterized LOC102614595

uncharacterized LOC102615917

uncharacterized LOC100795590

uncharacterized LOC100254691

uncharacterized LOC100243899

uncharacterized LOC7465497

uncharacterized LOC18105156

uncharacterized LOC25491882

uncharacterized LOC11442409

uncharacterized LOC101265167

uncharacterized LOC101263682

uncharacterized LOC102592161

uncharacterized LOC102586936

uncharacterized LOC107785241

uncharacterized LOC107768939

uncharacterized LOC107810238

uncharacterized LOC4336592

uncharacterized LOC4330206

uncharacterized LOC103653870

Uncharacterized conserved protein (UCP012943)

uncharacterized LOC123046403

uncharacterized LOC123145043

uncharacterized LOC123190135

uncharacterized LOC123402446

uncharacterized LOC123427569

uncharacterized LOC8076235

uncharacterized LOC100834760

uncharacterized LOC100822545

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00052	Galactose metabolism	3
ath00520	Amino sugar and nucleotide sugar metabolism	2
ath01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00195	Photosynthesis	3
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2
gma00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	6
vvi00195	Photosynthesis	4
vvi01200	Carbon metabolism	3
vvi00630	Glyoxylate and dicarboxylate metabolism	2
vvi00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	7
ppo00630	Glyoxylate and dicarboxylate metabolism	6
ppo00710	Carbon fixation by Calvin cycle	4
ppo00250	Alanine, aspartate and glutamate metabolism	3
ppo00260	Glycine, serine and threonine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00620	Pyruvate metabolism	2
sly00640	Propanoate metabolism	2
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00710	Carbon fixation by Calvin cycle	2
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	4
nta03008	Ribosome biogenesis in eukaryotes	3
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
nta01230	Biosynthesis of amino acids	2
nta00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	3
nta04142	Lysosome	2
nta00730	Thiamine metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00561	Glycerolipid metabolism	2
osa04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	2
zma04075	Plant hormone signal transduction	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00600	Sphingolipid metabolism	3
tae04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00061	Fatty acid biosynthesis	2
tae01040	Biosynthesis of unsaturated fatty acids	2
tae01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00600	Sphingolipid metabolism	3
tae04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00900	Terpenoid backbone biosynthesis	3
bdi00260	Glycine, serine and threonine metabolism	2
bdi00630	Glyoxylate and dicarboxylate metabolism	2
bdi01200	Carbon metabolism	2
bdi01230	Biosynthesis of amino acids	2

Expression

Expression pattern

Entrez Gene ID^*

828620

103862954

103834886

106401796

106346569

106426423

107912051

107923123

102614279

102614595

102615917

100795590

100254691

100243899

7465497

18105156

25491882

11442409

101265167

101263682

102592161

102586936

107785241

107768939

107810238

4336592

4330206

103653870

100276928

123046403

123145043

123190135

123402446

123427569

8076235

100834760

100822545

The preparation time of this page was 0.2 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	9	2	2	2	3	1	2	2	2	2	2	3	2	2	3	2	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT4G25170 (ath-u.5 coexpression data)

Top 50 enrichment test to AT4G25170 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**