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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   SLK3   SEUSS-like 3 
 ath-r.7   SLK3   SEUSS-like 3 
 ath-e.2   SLK3   SEUSS-like 3 
 ath-u.5   SLK1   SEUSS-like 1 
 ath-u.5   SLK2   SEUSS-like 2 
 gma-u.5   547529   probable transcriptional regulator SLK2 
 gma-u.5   100816886   probable transcriptional regulator SLK2 
 gma-u.5   100789452   probable transcriptional regulator SLK2 
 vvi-u.5   100265879   probable transcriptional regulator SLK2 
 vvi-u.5   100254797   probable transcriptional regulator SLK2 
 ppo-u.5   7454480   probable transcriptional regulator SLK2 
 ppo-u.5   18103960   probable transcriptional regulator SLK2 
 mtr-u.5   120575899   probable transcriptional regulator SLK2 
 sly-u.5   SEU2   transcriptional corepressor SEU2 
 osa-u.5   4339967   probable transcriptional regulator SLK3 
 zma-u.5   100502315   uncharacterized LOC100502315 
 zma-u.5   100383356   putative transcriptional regulator SLK2 
 zma-u.5   100280226   uncharacterized LOC100280226 

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Top 50 coexpressed genes to SLK3 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SLK3 (ath-u.5 coexpression data)

CoexMap"828656"


athSLK3 | Entrez gene ID : 828656      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 3 2 2 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_680741.5 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 4,  E.R. 1,  pero 1  (predict for NP_680741.5)
Subcellular
localization
TargetP
chlo 6,  other 3  (predict for NP_680741.5)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
SLK3
ath-r.7
for
SLK3
ath-e.2
for
SLK3
ath-u.5
for
SLK1
ath-u.5
for
SLK2
gma-u.5
for
547529
gma-u.5
for
100816886
gma-u.5
for
100789452
vvi-u.5
for
100265879
vvi-u.5
for
100254797
ppo-u.5
for
7454480
ppo-u.5
for
18103960
mtr-u.5
for
120575899
sly-u.5
for
SEU2
osa-u.5
for
4339967
zma-u.5
for
100502315
zma-u.5
for
100383356
zma-u.5
for
100280226


Ortholog ID: 2664
Species ath ath bra bna bna ghi ghi cit gma gma vvi vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae hvu hvu sbi sbi bdi
Symbol SLK2 SLK3 LOC103861563 LOC106418256 LOC125601363 LOC107947293 LOC107923489 LOC102621625 LOC547529 LOC100789452 LOC100254797 LOC100265879 LOC7454480 LOC18103960 LOC120575899 SEU2 LOC102584857 LOC107797288 LOC107811376 LOC4339967 LOC100502315 LOC100383356 LOC123149570 LOC123162671 LOC123413641 LOC123412891 LOC110431238 LOC8081171 LOC100842018
Function* SEUSS-like 2 SEUSS-like 3 probable transcriptional regulator SLK1 probable transcriptional regulator SLK1 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 transcriptional corepressor SEU2 probable transcriptional regulator SLK2 putative transcriptional regulator SLK2 putative transcriptional regulator SLK2 probable transcriptional regulator SLK3 uncharacterized LOC100502315 putative transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK3 probable transcriptional regulator SLK3 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK2 probable transcriptional regulator SLK3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 3
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03250 Viral life cycle - HIV-1 3
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly03250 Viral life cycle - HIV-1 2
sly03272 Virion - Hepatitis viruses 2
sly04144 Endocytosis 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 2
hvu03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836329 828656 103861563 106418256 125601363 107947293 107923489 102621625 547529 100789452 100254797 100265879 7454480 18103960 120575899 101265803 102584857 107797288 107811376 4339967 100502315 100383356 123149570 123162671 123413641 123412891 110431238 8081171 100842018
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